Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 HMGB3P26-201ENST00000560051 582 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 RPL23AP87-202ENST00000573039 466 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 RN7SL52P-201ENST00000584271 284 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 HMGB2P1-201ENST00000591146 634 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 CYP2C61P-201ENST00000604072 290 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 AP001836.1-201ENST00000604675 523 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 EIF3FP1-201ENST00000613970 806 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF2Q99805 AC010378.1-201ENST00000619270 362 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 AC022418.1-201ENST00000624118 445 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TM9SF2Q99805 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
TM9SF2Q99805 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF2Q99805 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF2Q99805 IRF5P1-201ENST00000504852 2164 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF2Q99805 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
TM9SF2Q99805 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF2Q99805 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.73□□□□□ -1.65
TM9SF2Q99805 AP000542.2-201ENST00000623199 6179 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
TM9SF2Q99805 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.73□□□□□ -1.65
TM9SF2Q99805 RNU5A-1-201ENST00000362698 116 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 RNU6-173P-201ENST00000364215 104 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 SNORA58B-201ENST00000364259 136 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TM9SF2Q99805 SNORA36C-201ENST00000384289 132 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 AC097374.1-203ENST00000400783 485 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 RN7SKP126-201ENST00000411143 300 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.73□□□□□ -1.65
TM9SF2Q99805 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.73□□□□□ -1.65
TM9SF2Q99805 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.73□□□□□ -1.65
TM9SF2Q99805 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.73□□□□□ -1.65
TM9SF2Q99805 RPL37P6-201ENST00000460682 294 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 RPL23AP2-201ENST00000471227 466 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 AC117503.1-201ENST00000472241 394 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 RPL7AP6-201ENST00000477943 801 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 AC022133.1-201ENST00000490961 571 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 MTCYBP40-201ENST00000509390 1135 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.73□□□□□ -1.65
TM9SF2Q99805 SNORA31.3-201ENST00000516029 96 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 RN7SKP66-201ENST00000516681 231 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 AC012400.1-201ENST00000518452 381 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.73□□□□□ -1.65
TM9SF2Q99805 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.73□□□□□ -1.65
TM9SF2Q99805 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.73□□□□□ -1.65
TM9SF2Q99805 BNIP3P1-201ENST00000547295 580 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 FAM60BP-201ENST00000578364 658 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 AC006116.3-201ENST00000592968 361 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.73□□□□□ -1.65
TM9SF2Q99805 AC016925.2-201ENST00000605108 242 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 AC116312.1-201ENST00000606841 314 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 MIR15A-201ENST00000607334 83 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 AL355802.3-201ENST00000607571 545 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 AC133104.2-201ENST00000615272 193 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 ATP5A1P2-202ENST00000616464 443 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 AP002799.1-201ENST00000623552 423 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 AC135068.12-201ENST00000637370 931 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TM9SF2Q99805 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TM9SF2Q99805 DDX18P3-201ENST00000404856 2007 ntBASIC4.73□□□□□ -1.65
TM9SF2Q99805 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TM9SF2Q99805 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TM9SF2Q99805 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
TM9SF2Q99805 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TM9SF2Q99805 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TM9SF2Q99805 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TM9SF2Q99805 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.72□□□□□ -1.65
TM9SF2Q99805 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.72□□□□□ -1.65
TM9SF2Q99805 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.72□□□□□ -1.65
TM9SF2Q99805 Y_RNA.197-201ENST00000364004 102 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 SNORA63C-201ENST00000364578 129 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TM9SF2Q99805 RNU6-629P-201ENST00000384061 103 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 RNU6-45P-201ENST00000384471 107 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 MIR600-201ENST00000385007 98 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AL391417.1-201ENST00000404100 426 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AL139397.2-201ENST00000404529 772 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AL445189.1-201ENST00000405722 338 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.72□□□□□ -1.65
TM9SF2Q99805 MTCO1P39-201ENST00000426148 480 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 RPL23AP69-201ENST00000431134 458 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AC073850.1-201ENST00000449243 255 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.72□□□□□ -1.65
TM9SF2Q99805 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
TM9SF2Q99805 RN7SL97P-201ENST00000486780 299 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 RN7SL814P-201ENST00000487715 300 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.72□□□□□ -1.65
TM9SF2Q99805 AC022360.1-201ENST00000521058 340 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AC021006.3-201ENST00000530771 192 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AC092490.3-201ENST00000545370 572 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.72□□□□□ -1.65
TM9SF2Q99805 MTCO3P23-201ENST00000561363 289 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.72□□□□□ -1.65
TM9SF2Q99805 MIR3691-201ENST00000578066 90 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.72□□□□□ -1.65
TM9SF2Q99805 AC069061.3-201ENST00000582254 823 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AC011447.4-201ENST00000587562 111 ntBASIC4.72□□□□□ -1.65
TM9SF2Q99805 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms