Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.7□□□□□ -1.98
IFT140Q96RY7 BX510359.4-201ENST00000423750 193 ntBASIC2.7□□□□□ -1.98
IFT140Q96RY7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.7□□□□□ -1.98
IFT140Q96RY7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.7□□□□□ -1.98
IFT140Q96RY7 RNA5SP220-201ENST00000516298 104 ntBASIC2.7□□□□□ -1.98
IFT140Q96RY7 OR4G1P-201ENST00000588632 938 ntBASIC2.7□□□□□ -1.98
IFT140Q96RY7 AC010200.2-201ENST00000605098 235 ntBASIC2.7□□□□□ -1.98
IFT140Q96RY7 CKAP2P1-201ENST00000555477 2049 ntBASIC2.69□□□□□ -1.98
IFT140Q96RY7 RNA5SP338-201ENST00000410495 85 ntBASIC2.69□□□□□ -1.98
IFT140Q96RY7 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.69□□□□□ -1.98
IFT140Q96RY7 PRELID2P1-201ENST00000552837 301 ntBASIC2.69□□□□□ -1.98
IFT140Q96RY7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.69□□□□□ -1.98
IFT140Q96RY7 AC136443.5-201ENST00000603741 370 ntBASIC2.69□□□□□ -1.98
IFT140Q96RY7 FO624990.1-201ENST00000636373 85 ntBASIC2.69□□□□□ -1.98
IFT140Q96RY7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
IFT140Q96RY7 MIR96-201ENST00000362288 78 ntBASIC2.68□□□□□ -1.98
IFT140Q96RY7 RNA5SP325-201ENST00000363756 130 ntBASIC2.68□□□□□ -1.98
IFT140Q96RY7 RNA5SP37-201ENST00000365420 130 ntBASIC2.68□□□□□ -1.98
IFT140Q96RY7 RNU1-109P-201ENST00000383960 147 ntBASIC2.68□□□□□ -1.98
IFT140Q96RY7 RN7SKP101-201ENST00000411376 320 ntBASIC2.68□□□□□ -1.98
IFT140Q96RY7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.68□□□□□ -1.98
IFT140Q96RY7 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.68□□□□□ -1.98
IFT140Q96RY7 XKRYP6-201ENST00000440468 1116 ntBASIC2.68□□□□□ -1.98
IFT140Q96RY7 XKRYP3-201ENST00000442113 1116 ntBASIC2.68□□□□□ -1.98
IFT140Q96RY7 OR7L1P-201ENST00000456181 380 ntBASIC2.68□□□□□ -1.98
IFT140Q96RY7 RN7SL274P-201ENST00000492268 272 ntBASIC2.68□□□□□ -1.98
IFT140Q96RY7 GTF2IP9-201ENST00000502460 301 ntBASIC2.68□□□□□ -1.98
IFT140Q96RY7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.68□□□□□ -1.98
IFT140Q96RY7 AC008526.1-201ENST00000509149 338 ntBASIC2.68□□□□□ -1.98
IFT140Q96RY7 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.68□□□□□ -1.98
IFT140Q96RY7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.68□□□□□ -1.98
IFT140Q96RY7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.68□□□□□ -1.98
IFT140Q96RY7 AL157834.3-201ENST00000615543 103 ntBASIC2.68□□□□□ -1.98
IFT140Q96RY7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
IFT140Q96RY7 AL589994.1-201ENST00000404962 340 ntBASIC2.67□□□□□ -1.98
IFT140Q96RY7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.67□□□□□ -1.98
IFT140Q96RY7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.67□□□□□ -1.98
IFT140Q96RY7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.67□□□□□ -1.98
IFT140Q96RY7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.67□□□□□ -1.98
IFT140Q96RY7 SMARCE1P4-201ENST00000523647 241 ntBASIC2.67□□□□□ -1.98
IFT140Q96RY7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.67□□□□□ -1.98
IFT140Q96RY7 AC008015.1-201ENST00000555505 465 ntBASIC2.67□□□□□ -1.98
IFT140Q96RY7 AC015720.1-201ENST00000565251 277 ntBASIC2.67□□□□□ -1.98
IFT140Q96RY7 MIR4419B-201ENST00000577260 68 ntBASIC2.67□□□□□ -1.98
IFT140Q96RY7 MIR4512-201ENST00000583257 77 ntBASIC2.67□□□□□ -1.98
IFT140Q96RY7 AC005296.1-201ENST00000616145 209 ntBASIC2.67□□□□□ -1.98
IFT140Q96RY7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
IFT140Q96RY7 AC006026.1-201ENST00000444025 1803 ntBASIC2.67□□□□□ -1.98
IFT140Q96RY7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
IFT140Q96RY7 RNU1-101P-201ENST00000391171 127 ntBASIC2.66□□□□□ -1.98
IFT140Q96RY7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.66□□□□□ -1.98
IFT140Q96RY7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.66□□□□□ -1.98
IFT140Q96RY7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.66□□□□□ -1.98
IFT140Q96RY7 RNU6-943P-201ENST00000516960 98 ntBASIC2.66□□□□□ -1.98
IFT140Q96RY7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.66□□□□□ -1.98
IFT140Q96RY7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.66□□□□□ -1.98
IFT140Q96RY7 AL078603.1-201ENST00000603824 313 ntBASIC2.66□□□□□ -1.98
IFT140Q96RY7 AC034102.8-201ENST00000615146 484 ntBASIC2.66□□□□□ -1.98
IFT140Q96RY7 MTND5P3-201ENST00000438536 1800 ntBASIC2.66□□□□□ -1.98
IFT140Q96RY7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
IFT140Q96RY7 DEFB109C-201ENST00000382575 264 ntBASIC2.65□□□□□ -1.98
IFT140Q96RY7 DEFB109B-201ENST00000382656 264 ntBASIC2.65□□□□□ -1.98
IFT140Q96RY7 USP9YP27-201ENST00000418455 438 ntBASIC2.65□□□□□ -1.98
IFT140Q96RY7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.65□□□□□ -1.98
IFT140Q96RY7 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.65□□□□□ -1.98
IFT140Q96RY7 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.65□□□□□ -1.98
IFT140Q96RY7 SNORA31.11-201ENST00000516528 139 ntBASIC2.65□□□□□ -1.98
IFT140Q96RY7 MIR4716-201ENST00000579628 84 ntBASIC2.65□□□□□ -1.98
IFT140Q96RY7 SNHG22-203ENST00000617833 660 ntBASIC2.65□□□□□ -1.98
IFT140Q96RY7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.65□□□□□ -1.98
IFT140Q96RY7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.65□□□□□ -1.98
IFT140Q96RY7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.65□□□□□ -1.98
IFT140Q96RY7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.65□□□□□ -1.98
IFT140Q96RY7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.98
IFT140Q96RY7 SNORA67.6-201ENST00000391093 99 ntBASIC2.65□□□□□ -1.99
IFT140Q96RY7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
IFT140Q96RY7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.65□□□□□ -1.99
IFT140Q96RY7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.65□□□□□ -1.99
IFT140Q96RY7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.65□□□□□ -1.99
IFT140Q96RY7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.65□□□□□ -1.99
IFT140Q96RY7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.65□□□□□ -1.99
IFT140Q96RY7 AC079203.1-201ENST00000487972 404 ntBASIC2.65□□□□□ -1.99
IFT140Q96RY7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.65□□□□□ -1.99
IFT140Q96RY7 MIR449C-201ENST00000516047 92 ntBASIC2.65□□□□□ -1.99
IFT140Q96RY7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.65□□□□□ -1.99
IFT140Q96RY7 MIR4446-201ENST00000578505 67 ntBASIC2.65□□□□□ -1.99
IFT140Q96RY7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
IFT140Q96RY7 ZNF209P-201ENST00000593450 2304 ntBASIC2.64□□□□□ -1.99
IFT140Q96RY7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
IFT140Q96RY7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
IFT140Q96RY7 RNU1-40P-201ENST00000516816 164 ntBASIC2.64□□□□□ -1.99
IFT140Q96RY7 RNU1-97P-201ENST00000516872 164 ntBASIC2.64□□□□□ -1.99
IFT140Q96RY7 SNORA31.24-201ENST00000517232 57 ntBASIC2.64□□□□□ -1.99
IFT140Q96RY7 MTND2P13-201ENST00000577438 1039 ntBASIC2.64□□□□□ -1.99
IFT140Q96RY7 APOOP1-201ENST00000604695 592 ntBASIC2.64□□□□□ -1.99
IFT140Q96RY7 AC009318.3-201ENST00000616916 503 ntBASIC2.64□□□□□ -1.99
IFT140Q96RY7 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
IFT140Q96RY7 RNU1-93P-201ENST00000364704 169 ntBASIC2.63□□□□□ -1.99
IFT140Q96RY7 RPL23AP29-201ENST00000397284 453 ntBASIC2.63□□□□□ -1.99
IFT140Q96RY7 RNA5SP492-201ENST00000411330 114 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms