Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RN7SKP53-201ENST00000411337 315 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AC019097.1-201ENST00000424783 735 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AC137499.1-201ENST00000427602 88 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 RPL23AP22-201ENST00000437556 453 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AC005094.1-201ENST00000440420 368 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 MTND1P12-201ENST00000455231 147 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 RPS4XP2-201ENST00000458402 793 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 RPS20P20-201ENST00000460498 340 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 MTND1P3-201ENST00000484956 952 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 NDUFB4P2-201ENST00000509515 391 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AC100870.1-201ENST00000522035 505 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AC011979.2-201ENST00000527568 352 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AC093012.1-202ENST00000549403 582 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AC006362.1-201ENST00000567392 174 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AP005136.1-201ENST00000579765 429 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 HMGN1P30-201ENST00000589286 268 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AC040904.1-201ENST00000590850 223 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 RSL24D1P11-201ENST00000591045 491 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AC119751.7-201ENST00000600494 245 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AC091953.2-201ENST00000623979 160 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 AC099654.13-201ENST00000639774 207 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 TEX21P-201ENST00000447107 1476 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 OR4G2P-202ENST00000641004 1759 ntBASIC3.58□□□□□ -1.84
NR1H4Q96RI1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NR1H4Q96RI1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AC079741.1-201ENST00000321498 212 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 Y_RNA.51-201ENST00000362725 102 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 Y_RNA.201-201ENST00000364052 96 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 RNY4P34-201ENST00000364779 95 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 MIR514A1-201ENST00000385133 98 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 MTND6P13-201ENST00000443510 523 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 USP9YP29-201ENST00000445112 563 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 MTND1P29-201ENST00000448112 647 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 RNA5SP246-201ENST00000458909 119 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 RPL31P60-201ENST00000478450 367 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AF213884.1-201ENST00000488102 463 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 MTCO3P28-201ENST00000513351 515 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AC114797.1-201ENST00000514003 728 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 RPL12P22-201ENST00000519073 490 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AC107934.1-201ENST00000522215 217 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AP003181.2-201ENST00000528941 181 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 TVP23BP1-201ENST00000557500 617 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 MIR3118-1-201ENST00000581787 76 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 ZNF415P1-201ENST00000582279 1166 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AC234771.5-201ENST00000600161 514 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 SNORA51-201ENST00000606420 132 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AL391813.2-201ENST00000609113 322 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AC107294.3-201ENST00000609211 526 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AC006338.1-201ENST00000618453 749 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 FRG1KP-201ENST00000623592 341 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AL136313.1-201ENST00000624804 202 ntBASIC3.57□□□□□ -1.84
NR1H4Q96RI1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NR1H4Q96RI1 AL158163.1-201ENST00000603915 1649 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 SNORA58B-201ENST00000364259 136 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 MIR591-201ENST00000385290 95 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 OR6C69P-201ENST00000394268 893 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms