Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TMEM248P1-201ENST00000510579 951 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX18Q96RF0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.92□□□□□ -1.78
SNX18Q96RF0 MTCO1P35-201ENST00000515270 228 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 RNU6-835P-201ENST00000516974 104 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.92□□□□□ -1.78
SNX18Q96RF0 AP003072.2-201ENST00000527756 676 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 OR4R1P-201ENST00000529879 463 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 RAB11AP2-201ENST00000545905 639 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 CR383656.7-201ENST00000548164 174 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 OR4T1P-201ENST00000554933 911 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX18Q96RF0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.92□□□□□ -1.78
SNX18Q96RF0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX18Q96RF0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX18Q96RF0 MIR4719-201ENST00000585233 84 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 C8orf59P2-201ENST00000603441 271 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 LLPHP1-201ENST00000603571 367 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 AC079587.1-201ENST00000603846 277 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 AL031176.1-201ENST00000604554 466 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.92□□□□□ -1.78
SNX18Q96RF0 AL034351.1-201ENST00000605288 668 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 AC010680.4-201ENST00000605334 543 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 BNIP3P10-201ENST00000605360 577 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.92□□□□□ -1.78
SNX18Q96RF0 AC245517.5-201ENST00000611529 162 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 RMST_3.1-201ENST00000611651 109 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 MIR486-1-201ENST00000612171 68 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SNX18Q96RF0 AL138713.1-201ENST00000624026 2130 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.92□□□□□ -1.78
SNX18Q96RF0 CKAP2P1-201ENST00000555477 2049 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.92□□□□□ -1.78
SNX18Q96RF0 MARK2P15-201ENST00000432204 2186 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX18Q96RF0 OR56B2P-202ENST00000641377 2453 ntBASIC3.92□□□□□ -1.78
SNX18Q96RF0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.91□□□□□ -1.78
SNX18Q96RF0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX18Q96RF0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX18Q96RF0 Y_RNA.61-201ENST00000362835 102 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 Y_RNA.86-201ENST00000363020 111 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 RNU5E-8P-201ENST00000363502 116 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 SNORA70.2-201ENST00000364506 135 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 RNU6-278P-201ENST00000390945 109 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 AL591416.1-201ENST00000404015 867 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 RNU2-62P-201ENST00000410868 191 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX18Q96RF0 OR51A5P-201ENST00000415429 942 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 AC016691.1-201ENST00000441321 413 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 CALM1P1-201ENST00000442082 433 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX18Q96RF0 RPS17P13-201ENST00000448974 407 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 MTND1P11-201ENST00000456661 876 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 NIPA2P2-201ENST00000496376 1083 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.91□□□□□ -1.78
SNX18Q96RF0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
SNX18Q96RF0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX18Q96RF0 FTH1P21-201ENST00000512179 511 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 RNU6-410P-201ENST00000517006 107 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.91□□□□□ -1.78
SNX18Q96RF0 AL133271.1-201ENST00000538229 291 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 HMGB1P6-201ENST00000569046 646 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.91□□□□□ -1.78
SNX18Q96RF0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX18Q96RF0 AL356218.2-201ENST00000605264 187 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 AC004908.2-201ENST00000609090 574 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 AC024940.5-201ENST00000622889 474 ntBASIC3.91□□□□□ -1.78
SNX18Q96RF0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX18Q96RF0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX18Q96RF0 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX18Q96RF0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX18Q96RF0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX18Q96RF0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX18Q96RF0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX18Q96RF0 MTCO1P9-201ENST00000505577 1534 ntBASIC3.9□□□□□ -1.78
SNX18Q96RF0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SNX18Q96RF0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SNX18Q96RF0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
SNX18Q96RF0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SNX18Q96RF0 RNU6-39P-201ENST00000384344 107 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SNX18Q96RF0 RNU6-1068P-201ENST00000410958 103 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX18Q96RF0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.9□□□□□ -1.79
SNX18Q96RF0 MTCO3P12-201ENST00000416718 547 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 OR1AA1P-201ENST00000419597 916 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.9□□□□□ -1.79
SNX18Q96RF0 EIF1P3-201ENST00000423841 334 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX18Q96RF0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.9□□□□□ -1.79
SNX18Q96RF0 OR4K11P-201ENST00000431829 904 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX18Q96RF0 MTND4LP16-201ENST00000440828 295 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 RPL21P89-201ENST00000444021 467 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 AC079781.2-201ENST00000446424 169 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 AC140076.1-201ENST00000449897 361 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 SNRPGP6-201ENST00000451124 220 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 AC009963.2-201ENST00000453431 138 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 AMD1P1-201ENST00000457220 922 ntBASIC3.9□□□□□ -1.79
SNX18Q96RF0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms