Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RPS3AP22-201ENST00000488297 769 ntBASIC1.34□□□□□ -2.2
CSMD1Q96PZ7 RPS29P20-201ENST00000489592 171 ntBASIC1.34□□□□□ -2.2
CSMD1Q96PZ7 SNORA70.14-201ENST00000516205 110 ntBASIC1.34□□□□□ -2.2
CSMD1Q96PZ7 SETP7-201ENST00000552169 453 ntBASIC1.34□□□□□ -2.2
CSMD1Q96PZ7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.34□□□□□ -2.2
CSMD1Q96PZ7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 RPL7P5-201ENST00000471472 736 ntBASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 AC090071.1-201ENST00000507713 644 ntBASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 RNU6-35P-201ENST00000384530 107 ntBASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 AL445183.3-201ENST00000414168 502 ntBASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 USP9YP27-201ENST00000418455 438 ntBASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 snoU13.3-201ENST00000459441 104 ntBASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 AC109471.1-201ENST00000511631 612 ntBASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 AC008133.2-201ENST00000624540 351 ntBASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 AC000367.1-201ENST00000452711 1766 ntBASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 RN7SKP101-201ENST00000411376 320 ntBASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 AC093084.1-201ENST00000424233 687 ntBASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 HMGN2P18-201ENST00000450680 270 ntBASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 AC068944.2-201ENST00000610373 403 ntBASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
CSMD1Q96PZ7 Y_RNA.258-201ENST00000364613 105 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 AL445213.1-201ENST00000412589 747 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 AC008885.2-201ENST00000509506 930 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 SNORA31.15-201ENST00000516771 132 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 AC019176.1-201ENST00000518519 225 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 AC090751.1-201ENST00000566966 267 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 MIR502-201ENST00000606349 86 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 AC241377.1-201ENST00000619797 406 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 WWP1P1-201ENST00000466609 2769 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 MIR1323-201ENST00000408090 73 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 RPL31P35-201ENST00000431058 377 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 EZH2P1-201ENST00000431167 291 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 AL139109.1-201ENST00000455491 297 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 AC069528.1-202ENST00000482888 637 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 AC109486.1-201ENST00000486833 374 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 AC087190.1-201ENST00000484462 480 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 RMST_6.1-201ENST00000611980 203 ntBASIC1.32□□□□□ -2.2
CSMD1Q96PZ7 SETP8-201ENST00000435341 628 ntBASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 RPS15AP1-201ENST00000457423 391 ntBASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 MIR4723-201ENST00000585070 81 ntBASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 AC008121.3-201ENST00000618726 433 ntBASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 PRELID2P1-201ENST00000552837 301 ntBASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 AL049838.1-201ENST00000563647 981 ntBASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 AC008127.2-201ENST00000549925 1075 ntBASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 AC023825.1-201ENST00000566704 1030 ntBASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 MIR4419B-201ENST00000577260 68 ntBASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.31□□□□□ -2.2
CSMD1Q96PZ7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 AL512430.2-201ENST00000406786 339 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 WARS2P1-201ENST00000429678 537 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 RPS6P12-201ENST00000432491 726 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 RPL34P26-201ENST00000445636 354 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 MTCYBP18-201ENST00000501056 747 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 AC099778.2-201ENST00000610904 211 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 STMN1P1-201ENST00000617809 440 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 MIR373-201ENST00000362273 69 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 MIRLET7G-201ENST00000362280 84 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 AL645568.3-201ENST00000433683 316 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 HMGB1P26-201ENST00000452520 628 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 AP002345.1-201ENST00000456493 928 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 ATG10-AS1-201ENST00000504846 648 ntBASIC1.3□□□□□ -2.2
CSMD1Q96PZ7 LRRC34P2-201ENST00000514850 553 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms