Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.1□□□□□ -2.07
ALPK3Q96L96 RPS29P12-201ENST00000460178 152 ntBASIC2.1□□□□□ -2.07
ALPK3Q96L96 MTND3P6-201ENST00000485242 339 ntBASIC2.1□□□□□ -2.07
ALPK3Q96L96 SNORA25.15-201ENST00000516487 89 ntBASIC2.1□□□□□ -2.07
ALPK3Q96L96 FAM92A1P1-201ENST00000528023 890 ntBASIC2.1□□□□□ -2.07
ALPK3Q96L96 AC087241.2-201ENST00000535801 324 ntBASIC2.1□□□□□ -2.07
ALPK3Q96L96 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.1□□□□□ -2.07
ALPK3Q96L96 AC010615.3-201ENST00000597319 394 ntBASIC2.1□□□□□ -2.07
ALPK3Q96L96 DUXAP4-201ENST00000603046 613 ntBASIC2.1□□□□□ -2.07
ALPK3Q96L96 AC010678.1-201ENST00000614118 713 ntBASIC2.1□□□□□ -2.07
ALPK3Q96L96 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
ALPK3Q96L96 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.1□□□□□ -2.07
ALPK3Q96L96 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.1□□□□□ -2.07
ALPK3Q96L96 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
ALPK3Q96L96 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
ALPK3Q96L96 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.09□□□□□ -2.07
ALPK3Q96L96 RNU1-109P-201ENST00000383960 147 ntBASIC2.09□□□□□ -2.07
ALPK3Q96L96 RNU6-1027P-201ENST00000383998 107 ntBASIC2.09□□□□□ -2.07
ALPK3Q96L96 AL513331.1-201ENST00000411908 397 ntBASIC2.09□□□□□ -2.07
ALPK3Q96L96 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.09□□□□□ -2.07
ALPK3Q96L96 ATP5F1P1-201ENST00000433775 569 ntBASIC2.09□□□□□ -2.07
ALPK3Q96L96 MTCO3P17-201ENST00000443775 513 ntBASIC2.09□□□□□ -2.07
ALPK3Q96L96 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.09□□□□□ -2.07
ALPK3Q96L96 SEM1P1-201ENST00000506694 209 ntBASIC2.09□□□□□ -2.07
ALPK3Q96L96 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.09□□□□□ -2.07
ALPK3Q96L96 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.09□□□□□ -2.07
ALPK3Q96L96 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.09□□□□□ -2.07
ALPK3Q96L96 MIR7973-1-201ENST00000614683 76 ntBASIC2.09□□□□□ -2.07
ALPK3Q96L96 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.09□□□□□ -2.07
ALPK3Q96L96 RNA5SP138-201ENST00000365098 114 ntBASIC2.09□□□□□ -2.08
ALPK3Q96L96 MIR320B1-201ENST00000390209 79 ntBASIC2.09□□□□□ -2.08
ALPK3Q96L96 RNU6-1077P-201ENST00000410506 102 ntBASIC2.09□□□□□ -2.08
ALPK3Q96L96 AC092638.1-201ENST00000411966 1275 ntBASIC2.09□□□□□ -2.08
ALPK3Q96L96 BX682237.1-201ENST00000415016 335 ntBASIC2.09□□□□□ -2.08
ALPK3Q96L96 RPL21P39-201ENST00000463605 483 ntBASIC2.09□□□□□ -2.08
ALPK3Q96L96 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.09□□□□□ -2.08
ALPK3Q96L96 RAC1P5-201ENST00000512182 576 ntBASIC2.09□□□□□ -2.08
ALPK3Q96L96 RNA5SP82-201ENST00000516707 92 ntBASIC2.09□□□□□ -2.08
ALPK3Q96L96 MTCYBP41-201ENST00000528913 1123 ntBASIC2.09□□□□□ -2.08
ALPK3Q96L96 AC091057.2-201ENST00000602594 792 ntBASIC2.09□□□□□ -2.08
ALPK3Q96L96 AL390240.1-201ENST00000612950 384 ntBASIC2.09□□□□□ -2.08
ALPK3Q96L96 uc_338.9-201ENST00000617424 182 ntBASIC2.09□□□□□ -2.08
ALPK3Q96L96 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ALPK3Q96L96 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ALPK3Q96L96 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ALPK3Q96L96 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
ALPK3Q96L96 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ALPK3Q96L96 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ALPK3Q96L96 DEFB109C-201ENST00000382575 264 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 DEFB109B-201ENST00000382656 264 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 RNU6-1181P-201ENST00000384191 106 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 RNU1-57P-201ENST00000384491 166 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 RPL21P75-201ENST00000396599 483 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 RPL21P28-201ENST00000401418 483 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 AL592114.1-201ENST00000403842 483 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 MIR1323-201ENST00000408090 73 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 RPS7P9-201ENST00000414704 586 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.08□□□□□ -2.08
ALPK3Q96L96 MTATP6P4-201ENST00000427725 675 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.08□□□□□ -2.08
ALPK3Q96L96 SUMO1P4-201ENST00000429430 302 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.08□□□□□ -2.08
ALPK3Q96L96 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.08□□□□□ -2.08
ALPK3Q96L96 AC092798.1-201ENST00000458542 409 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 AC011979.1-201ENST00000472300 483 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 RPL21P93-201ENST00000480465 489 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 AC233702.1-201ENST00000482905 502 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 AC079804.2-201ENST00000490376 200 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 AC093591.1-201ENST00000491435 481 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 RPL21P16-201ENST00000495531 483 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 RNA5SP182-201ENST00000516064 82 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 RNU6-250P-201ENST00000516958 103 ntBASIC2.08□□□□□ -2.08
ALPK3Q96L96 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.08□□□□□ -2.08
ALPK3Q96L96 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ALPK3Q96L96 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
ALPK3Q96L96 AC004965.1-201ENST00000413033 213 ntBASIC2.07□□□□□ -2.08
ALPK3Q96L96 AC241520.1-201ENST00000422654 1099 ntBASIC2.07□□□□□ -2.08
ALPK3Q96L96 RPS6P14-201ENST00000425165 719 ntBASIC2.07□□□□□ -2.08
ALPK3Q96L96 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.07□□□□□ -2.08
ALPK3Q96L96 DNAJC19P4-201ENST00000440115 345 ntBASIC2.07□□□□□ -2.08
ALPK3Q96L96 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.07□□□□□ -2.08
ALPK3Q96L96 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.07□□□□□ -2.08
ALPK3Q96L96 MTAPP1-201ENST00000489154 819 ntBASIC2.07□□□□□ -2.08
ALPK3Q96L96 AC011352.3-201ENST00000505162 593 ntBASIC2.07□□□□□ -2.08
ALPK3Q96L96 RN7SKP277-201ENST00000516895 283 ntBASIC2.07□□□□□ -2.08
ALPK3Q96L96 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.07□□□□□ -2.08
ALPK3Q96L96 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.07□□□□□ -2.08
ALPK3Q96L96 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.07□□□□□ -2.08
ALPK3Q96L96 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.07□□□□□ -2.08
ALPK3Q96L96 FAM60CP-201ENST00000591086 664 ntBASIC2.07□□□□□ -2.08
ALPK3Q96L96 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.07□□□□□ -2.08
ALPK3Q96L96 AP003117.1-201ENST00000602771 554 ntBASIC2.07□□□□□ -2.08
ALPK3Q96L96 AL391834.1-201ENST00000609609 560 ntBASIC2.07□□□□□ -2.08
ALPK3Q96L96 AC008083.4-201ENST00000615076 444 ntBASIC2.07□□□□□ -2.08
ALPK3Q96L96 LINC00216-201ENST00000623548 1126 ntBASIC2.07□□□□□ -2.08
ALPK3Q96L96 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
ALPK3Q96L96 AC138915.1-201ENST00000565427 1685 ntBASIC2.07□□□□□ -2.08
ALPK3Q96L96 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
ALPK3Q96L96 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms