Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 FTH1P6-201ENST00000430768 320 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 TIMM9P1-201ENST00000436122 256 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 ELOCP30-201ENST00000447108 299 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AP000873.1-201ENST00000463987 400 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AC010587.1-201ENST00000505809 469 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AC022483.1-201ENST00000514020 567 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 MTCO2P4-201ENST00000517968 247 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AC107934.1-201ENST00000522215 217 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AC109635.4-202ENST00000531666 412 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 MIR4429-201ENST00000580105 73 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AL022099.1-201ENST00000604551 712 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AC110741.2-201ENST00000605278 268 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AL161734.1-201ENST00000609720 557 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 MIR486-1-201ENST00000612171 68 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AL133173.2-201ENST00000614270 90 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AC019226.1-201ENST00000625666 515 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 AP001350.1-201ENST00000601906 1524 ntBASIC4.62□□□□□ -1.67
CHMP4CQ96CF2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 SNORA62.3-201ENST00000365110 153 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 RNU6-259P-201ENST00000383999 107 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 RNU6-213P-201ENST00000384051 104 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AL445189.1-201ENST00000405722 338 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 RNU2-62P-201ENST00000410868 191 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 ELOCP17-201ENST00000414751 326 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AL031779.1-201ENST00000415663 330 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 MTCO1P21-201ENST00000416634 589 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 BX295541.1-201ENST00000417774 250 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AC019097.1-201ENST00000424783 735 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AC135721.1-201ENST00000497954 479 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 KLHL2P1-201ENST00000508691 521 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AC004062.1-201ENST00000509926 645 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AC023141.12-201ENST00000512399 199 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 DEFB108D-201ENST00000527787 222 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AL133153.1-201ENST00000557756 303 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AL161729.4-201ENST00000604650 476 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AL034351.1-201ENST00000605288 668 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AL121772.2-201ENST00000614331 297 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AL391261.4-201ENST00000616012 481 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AL353748.2-201ENST00000622148 471 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AL732618.1-201ENST00000623251 301 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 AC112200.1-201ENST00000625015 234 ntBASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.61□□□□□ -1.67
CHMP4CQ96CF2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 DDX10P1-201ENST00000448545 1933 ntBASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 RNU6-223P-201ENST00000362830 107 ntBASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 RNU6-173P-201ENST00000364215 104 ntBASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 SNORD6-201ENST00000365444 73 ntBASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 RNU1-89P-201ENST00000384592 164 ntBASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 MIR670-201ENST00000390142 98 ntBASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 RNU6-754P-201ENST00000391166 107 ntBASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 RPS3AP24-201ENST00000407896 734 ntBASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 USP9YP36-201ENST00000424581 829 ntBASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 AC104651.1-201ENST00000427559 735 ntBASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 AC004866.2-201ENST00000438285 481 ntBASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 MTND1P12-201ENST00000455231 147 ntBASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 RPS3AP17-201ENST00000472594 777 ntBASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 AC020893.1-201ENST00000502452 580 ntBASIC4.6□□□□□ -1.67
CHMP4CQ96CF2 MTND2P33-201ENST00000506452 1031 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms