Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC093278.1-201ENST00000494700 600 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AC108078.1-201ENST00000508073 725 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 RNU6-314P-201ENST00000516574 104 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AL133271.1-201ENST00000538229 291 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AL845331.3-202ENST00000562856 261 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 OR4K8P-201ENST00000578842 1048 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 SNORD84-203ENST00000584275 78 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AL139286.1-201ENST00000604465 483 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AC126118.1-201ENST00000607744 628 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 U4.5-201ENST00000617137 123 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 AL160394.1-201ENST00000624765 724 ntBASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM43Q96BQ3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 RNY1P12-201ENST00000364251 105 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 RNU6-637P-201ENST00000384050 107 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 RNU6-432P-201ENST00000384196 109 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 SNORD96B-201ENST00000386148 79 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 RNU6-278P-201ENST00000390945 109 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 ATP5A1P2-201ENST00000412323 255 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 VDAC1P9-201ENST00000412766 841 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 AC133104.1-201ENST00000429100 218 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 FCF1P1-201ENST00000432690 571 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 TIMM9P1-201ENST00000436122 256 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 AC069285.2-201ENST00000440210 275 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 PSPHP1-201ENST00000450062 261 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 AC093392.2-201ENST00000450682 337 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 MTND1P12-201ENST00000455231 147 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 C1DP4-201ENST00000455429 424 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 RNU7-59P-201ENST00000459101 61 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 MTCO2P29-201ENST00000465212 189 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 RN7SL601P-201ENST00000471221 293 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 AC114967.1-201ENST00000504890 259 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 AL121603.1-201ENST00000553815 142 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 OR4T1P-201ENST00000554933 911 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 AP000860.1-201ENST00000605250 559 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 RMST_9.1-201ENST00000619945 193 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 AL138713.1-201ENST00000624026 2130 ntBASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM43Q96BQ3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
TRIM43Q96BQ3 AC008725.1-201ENST00000605123 2263 ntBASIC4.21□□□□□ -1.73
TRIM43Q96BQ3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.21□□□□□ -1.73
TRIM43Q96BQ3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.21□□□□□ -1.73
TRIM43Q96BQ3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 RNU6-1155P-201ENST00000363554 107 ntBASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 SNORA20.2-201ENST00000383922 131 ntBASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 AL122016.1-201ENST00000403365 367 ntBASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 AL603766.1-201ENST00000407763 664 ntBASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 RNU2-62P-201ENST00000410868 191 ntBASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 AL160275.2-201ENST00000412010 394 ntBASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 RAD23BP2-201ENST00000416003 1207 ntBASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 MTCO3P12-201ENST00000416718 547 ntBASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 ELOCP4-201ENST00000420090 333 ntBASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 EIF1P1-201ENST00000421436 341 ntBASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 AC137499.1-201ENST00000427602 88 ntBASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 AL451074.3-201ENST00000437709 472 ntBASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 AC093156.1-201ENST00000440382 670 ntBASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 RPS3AP46-201ENST00000448352 682 ntBASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.21□□□□□ -1.74
TRIM43Q96BQ3 RAD23BP3-201ENST00000454157 1152 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms