Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNU6-1066P-201ENST00000363573 105 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 RNA5SP171-201ENST00000391071 115 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AL162578.1-201ENST00000406202 378 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 MIR1303-201ENST00000408625 86 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 RNU6ATAC-201ENST00000408749 126 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 RNA5SP146-201ENST00000410743 123 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AC245054.2-201ENST00000415639 319 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AC133104.1-201ENST00000429100 218 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AC236972.2-201ENST00000434979 310 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 HLA-N-201ENST00000437516 135 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 MTND5P22-201ENST00000458380 195 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AC083798.1-201ENST00000472671 131 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 RPS3AP50-201ENST00000487064 803 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AC093853.1-201ENST00000515689 483 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 RNU6-885P-201ENST00000516607 104 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 RNA5SP135-201ENST00000517019 125 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 RNU6-1261P-201ENST00000517194 104 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AP001189.2-201ENST00000527320 189 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AC013828.2-201ENST00000532487 235 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 SCOCP1-201ENST00000554676 349 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AC022968.1-201ENST00000567372 442 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AC103710.3-201ENST00000608157 948 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 AC012442.3-202ENST00000636742 206 ntBASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SH3RF3Q8TEJ3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 RNU1-85P-201ENST00000364127 164 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 Y_RNA.401-201ENST00000383965 117 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 SNORD115.1-201ENST00000391109 76 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AC068050.1-201ENST00000394891 380 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AL590704.1-201ENST00000402856 794 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 TXNP7-201ENST00000406296 293 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 RNU6-1068P-201ENST00000410958 103 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 GOT2P5-201ENST00000433995 546 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 RPS7P5-201ENST00000441482 581 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AC006480.1-201ENST00000449887 378 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 RPL26P28-201ENST00000451325 435 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 BX248409.1-201ENST00000455497 255 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 RPL30P11-201ENST00000495304 339 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AC018630.1-201ENST00000541376 925 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 MIR4444-1-201ENST00000581696 74 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 MIR544B-201ENST00000582372 78 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 MIR4444-2-201ENST00000584390 74 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AC016925.2-201ENST00000605108 242 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 BCRP9-201ENST00000605312 388 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AL355472.4-201ENST00000610233 626 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 CR392039.5-201ENST00000623201 510 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AC040168.1-201ENST00000623594 991 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AC046144.1-201ENST00000478559 1853 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AP001350.1-201ENST00000601906 1524 ntBASIC4.72□□□□□ -1.65
SH3RF3Q8TEJ3 AC068254.2-201ENST00000623938 3577 ntBASIC4.71□□□□□ -1.65
SH3RF3Q8TEJ3 AL139811.1-201ENST00000424779 2299 ntBASIC4.71□□□□□ -1.65
SH3RF3Q8TEJ3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 RNU6-505P-201ENST00000384427 107 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 U8.11-201ENST00000384699 133 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 U8.12-201ENST00000384701 133 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 PTMAP2-201ENST00000397627 327 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 RPS4XP8-201ENST00000402039 771 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 RN7SKP156-201ENST00000410308 342 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 MTND3P8-201ENST00000412909 339 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 SPA17P1-201ENST00000416656 452 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 BOLA3P4-201ENST00000418151 400 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AC083875.1-201ENST00000419509 405 ntBASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.71□□□□□ -1.66
SH3RF3Q8TEJ3 AC023347.2-201ENST00000433994 462 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms