Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.23□□□□□ -2.05
LMX1AQ8TE12 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.23□□□□□ -2.05
LMX1AQ8TE12 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
LMX1AQ8TE12 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
LMX1AQ8TE12 MIR21-201ENST00000362134 72 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 RNU6-481P-201ENST00000384194 107 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 RNU6-921P-201ENST00000384361 107 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 MIR525-201ENST00000384978 85 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 MIR221-201ENST00000385135 110 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AL513477.1-202ENST00000417061 214 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AL137014.1-201ENST00000420490 1226 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.22□□□□□ -2.05
LMX1AQ8TE12 MTND4P15-201ENST00000437913 1033 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AC104073.1-201ENST00000451988 151 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.22□□□□□ -2.05
LMX1AQ8TE12 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AC025768.1-201ENST00000510057 267 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AC112673.1-201ENST00000513168 575 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 SNORA31.15-201ENST00000516771 132 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
LMX1AQ8TE12 OR5BN1P-201ENST00000532955 829 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 SNRPGP18-201ENST00000553000 214 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AC023824.3-201ENST00000569003 562 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AC106791.2-201ENST00000604680 391 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AC019159.1-201ENST00000605094 187 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 HSPE1P14-201ENST00000605812 302 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AC090116.1-201ENST00000615679 446 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AC068722.2-201ENST00000618734 544 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AL445493.3-201ENST00000619568 477 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AC098679.5-201ENST00000624394 571 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.22□□□□□ -2.05
LMX1AQ8TE12 MTND2P41-201ENST00000637599 773 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
LMX1AQ8TE12 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LMX1AQ8TE12 MTCO1P4-201ENST00000520516 1409 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AC138915.1-201ENST00000565427 1685 ntBASIC2.22□□□□□ -2.05
LMX1AQ8TE12 AC099654.7-201ENST00000635788 2127 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LMX1AQ8TE12 RPL21P132-201ENST00000331267 462 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 VTRNA1-1-201ENST00000363120 99 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 RNU1-51P-201ENST00000365345 176 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 MIR649-201ENST00000384843 97 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 MIR16-1-201ENST00000385271 89 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 RNU6-932P-201ENST00000391108 106 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.21□□□□□ -2.06
LMX1AQ8TE12 RN7SKP32-201ENST00000410167 303 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 RPL19P1-201ENST00000411635 428 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.21□□□□□ -2.06
LMX1AQ8TE12 AC002542.1-201ENST00000440683 193 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 HSFY3P-201ENST00000444242 1191 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.21□□□□□ -2.06
LMX1AQ8TE12 HMGN1P5-201ENST00000448591 263 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 RPS4XP6-201ENST00000477670 797 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 AC104090.1-201ENST00000506341 1171 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 AC009901.1-201ENST00000506703 541 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 AC121161.1-201ENST00000510606 652 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 OR8K2P-201ENST00000524645 927 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.21□□□□□ -2.06
LMX1AQ8TE12 YWHAZP1-201ENST00000556286 722 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.21□□□□□ -2.06
LMX1AQ8TE12 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.21□□□□□ -2.06
LMX1AQ8TE12 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.21□□□□□ -2.06
LMX1AQ8TE12 AC074051.3-201ENST00000570238 358 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 BPTFP1-201ENST00000579209 492 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.21□□□□□ -2.06
LMX1AQ8TE12 RN7SL622P-201ENST00000585292 275 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.21□□□□□ -2.06
LMX1AQ8TE12 RPL23AP78-201ENST00000599928 470 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 SGO1P1-201ENST00000603525 1447 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.21□□□□□ -2.06
LMX1AQ8TE12 AL136981.2-201ENST00000617319 734 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.21□□□□□ -2.06
LMX1AQ8TE12 AC110994.2-201ENST00000635481 492 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 AL163152.1-201ENST00000642001 374 ntBASIC2.21□□□□□ -2.06
LMX1AQ8TE12 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
LMX1AQ8TE12 ZNF849P-201ENST00000594711 1566 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LMX1AQ8TE12 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
LMX1AQ8TE12 SNORD56.5-201ENST00000364281 72 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 RNA5SP139-201ENST00000364340 117 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 SNORA1.3-201ENST00000384676 136 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 AC092638.1-201ENST00000411966 1275 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 RAP1BP1-201ENST00000412709 553 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 RPS6P14-201ENST00000425165 719 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 RPL31P54-201ENST00000429803 370 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 AC018634.1-201ENST00000437554 401 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.2□□□□□ -2.06
LMX1AQ8TE12 UBBP3-201ENST00000445497 241 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 AL050341.1-201ENST00000447743 313 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 AL590664.1-201ENST00000448065 339 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 AL096803.2-201ENST00000450032 677 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms