Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC244505.4-201ENST00000434905 287 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 SSXP5-201ENST00000443473 287 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC072039.1-201ENST00000477611 581 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 RN7SKP96-201ENST00000516948 297 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 RNA5SP402-201ENST00000517148 110 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 MTCYBP28-201ENST00000566728 1132 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC010546.1-201ENST00000569391 485 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC091953.2-201ENST00000623979 160 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC110994.2-201ENST00000635481 492 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 RNA5SP38-201ENST00000410750 119 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC234782.4-201ENST00000417646 1048 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 RPL37P6-202ENST00000464216 403 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC068339.2-201ENST00000534395 618 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 MIR6132-201ENST00000622083 109 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 RNU1-57P-201ENST00000384491 166 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 RNU2-32P-201ENST00000411193 191 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 MED6P1-201ENST00000439659 713 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AL118520.1-201ENST00000450770 291 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC089999.1-201ENST00000460336 374 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 HMGB3P15-201ENST00000507326 574 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC126177.3-201ENST00000551839 688 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC023043.3-201ENST00000593113 385 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AL449363.1-201ENST00000617815 186 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 MIR6515-201ENST00000619843 57 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 LSM1P1-201ENST00000438629 273 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 IPO7P1-201ENST00000442031 636 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 RPL17P49-201ENST00000443728 411 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AL445669.2-201ENST00000454425 421 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AP005660.1-201ENST00000522972 293 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 KPNA2P1-201ENST00000458289 1591 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AL353705.4-201ENST00000449661 238 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC073387.2-201ENST00000604797 784 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 HMGN1P33-201ENST00000432945 451 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 USP9YP15-201ENST00000442391 422 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 CALM1P2-201ENST00000452941 448 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 MTCYBP41-201ENST00000528913 1123 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AL133370.2-201ENST00000619934 439 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AGL-204ENST00000370161 6923 ntTSL 5 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 SNORA51.12-201ENST00000384448 134 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 HNRNPDP2-201ENST00000406475 478 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC110792.2-201ENST00000510278 224 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 RNA5SP200-201ENST00000516360 103 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC068831.7-201ENST00000616954 363 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 RNA5SP190-201ENST00000365222 118 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AL627224.1-201ENST00000448334 444 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 RNU6-250P-201ENST00000516958 103 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 RNA5SP138-201ENST00000365098 114 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms