Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRT78Q8N1N4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.1□□□□□ -1.75
KRT78Q8N1N4 AC068831.4-201ENST00000556118 109 ntBASIC4.1□□□□□ -1.75
KRT78Q8N1N4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.1□□□□□ -1.75
KRT78Q8N1N4 SNORA59B-202ENST00000578183 701 ntBASIC4.1□□□□□ -1.75
KRT78Q8N1N4 MIR4293-201ENST00000584305 78 ntBASIC4.1□□□□□ -1.75
KRT78Q8N1N4 AL136363.1-201ENST00000605349 337 ntBASIC4.1□□□□□ -1.75
KRT78Q8N1N4 AL031666.3-201ENST00000609320 1006 ntBASIC4.1□□□□□ -1.75
KRT78Q8N1N4 FAM27D1-201ENST00000612308 341 ntBASIC4.1□□□□□ -1.75
KRT78Q8N1N4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.1□□□□□ -1.75
KRT78Q8N1N4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.1□□□□□ -1.75
KRT78Q8N1N4 MIR7702-201ENST00000621931 59 ntBASIC4.1□□□□□ -1.75
KRT78Q8N1N4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.1□□□□□ -1.75
KRT78Q8N1N4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
KRT78Q8N1N4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KRT78Q8N1N4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KRT78Q8N1N4 SDAD1P2-201ENST00000441308 2028 ntBASIC4.1□□□□□ -1.75
KRT78Q8N1N4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.1□□□□□ -1.75
KRT78Q8N1N4 AL158163.1-201ENST00000603915 1649 ntBASIC4.1□□□□□ -1.75
KRT78Q8N1N4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC008725.1-201ENST00000605123 2263 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 RNU1-14P-201ENST00000362759 152 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 RNU6-181P-201ENST00000363225 107 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 DEFB109C-201ENST00000382575 264 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 DEFB109B-201ENST00000382656 264 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 RNA5SP36-201ENST00000410197 133 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 RNU2-37P-201ENST00000410695 177 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 RNU4-55P-201ENST00000410731 137 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AL356867.1-201ENST00000429623 299 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 GPR143P-201ENST00000434155 205 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 RPL23AP46-201ENST00000438548 490 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC079781.2-201ENST00000446424 169 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 SNRPGP6-201ENST00000451124 220 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 RPS29P19-201ENST00000479709 171 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 HMGB1P29-201ENST00000505659 499 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC020593.1-201ENST00000507399 299 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 RNU6-445P-201ENST00000516949 107 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 RNU6-410P-201ENST00000517006 107 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 HMGB1P41-201ENST00000520234 440 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AL121579.1-201ENST00000555129 305 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 SUB1P2-201ENST00000556401 297 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC098848.2-201ENST00000588023 330 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 BDH2P1-201ENST00000602288 736 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AL670379.6-201ENST00000603753 252 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AL670379.11-201ENST00000604059 253 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC008162.1-201ENST00000604718 254 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AL670379.1-201ENST00000604752 252 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AL670379.5-201ENST00000605253 252 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AL670379.12-201ENST00000605291 253 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AL670379.8-201ENST00000605353 252 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AL670379.7-201ENST00000605823 252 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC103710.2-201ENST00000609912 942 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 MTND4P23-201ENST00000447723 1363 ntBASIC4.09□□□□□ -1.75
KRT78Q8N1N4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KRT78Q8N1N4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
KRT78Q8N1N4 Z82217.1-201ENST00000625157 8149 ntBASIC4.09□□□□□ -1.76
KRT78Q8N1N4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.09□□□□□ -1.76
KRT78Q8N1N4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
KRT78Q8N1N4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.08□□□□□ -1.76
KRT78Q8N1N4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.08□□□□□ -1.76
KRT78Q8N1N4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.08□□□□□ -1.76
KRT78Q8N1N4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRT78Q8N1N4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRT78Q8N1N4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KRT78Q8N1N4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRT78Q8N1N4 AC007685.1-201ENST00000329806 452 ntBASIC4.08□□□□□ -1.76
KRT78Q8N1N4 RNU6-511P-201ENST00000363496 107 ntBASIC4.08□□□□□ -1.76
KRT78Q8N1N4 RNA5SP509-201ENST00000364577 119 ntBASIC4.08□□□□□ -1.76
KRT78Q8N1N4 Y_RNA.813-201ENST00000364639 102 ntBASIC4.08□□□□□ -1.76
KRT78Q8N1N4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
KRT78Q8N1N4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
KRT78Q8N1N4 RNU6-641P-201ENST00000384006 107 ntBASIC4.08□□□□□ -1.76
KRT78Q8N1N4 AL359634.1-202ENST00000404721 284 ntBASIC4.08□□□□□ -1.76
KRT78Q8N1N4 RNU2-36P-201ENST00000410361 191 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms