Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 RN7SL330P-201ENST00000469709 307 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AL358832.1-201ENST00000497800 389 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 RNU6-405P-201ENST00000516637 110 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AP003497.1-201ENST00000528472 562 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 OR5D17P-201ENST00000531492 978 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AC015871.2-201ENST00000603605 948 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AC010591.1-201ENST00000603941 649 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AC108479.2-201ENST00000617314 601 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AC084035.1-201ENST00000634543 607 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AC244258.1-201ENST00000637553 1071 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 AC099654.13-201ENST00000639774 207 ntBASIC3.99□□□□□ -1.77
VPS52Q8N1B4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS52Q8N1B4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AL157700.1-201ENST00000561973 1432 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 RPL7P25-201ENST00000404151 721 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC091390.3-201ENST00000426478 338 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC073063.1-201ENST00000434352 607 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 SNORA71B-202ENST00000439232 272 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC108734.1-201ENST00000439549 399 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC104308.1-201ENST00000454621 333 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 SNORD105B-201ENST00000458770 79 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 SNORD121B-201ENST00000458838 81 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 RPL21P104-201ENST00000464143 478 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 RPL31P13-201ENST00000484151 370 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 LARP1BP2-201ENST00000486594 519 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 RAC1P2-201ENST00000511164 579 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 RN7SKP13-201ENST00000515933 244 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 ZNF519P3-201ENST00000557158 1032 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC090877.1-201ENST00000561418 344 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC005951.1-201ENST00000576706 485 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 ZNF415P1-201ENST00000582279 1166 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC010928.3-201ENST00000587712 541 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 BNIP3P8-201ENST00000597863 560 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 NDUFA8P1-201ENST00000605525 367 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AL139286.2-201ENST00000606838 396 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC131902.3-201ENST00000611767 581 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AL442067.2-201ENST00000614033 363 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 U73479.1-201ENST00000618062 168 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AL359740.1-201ENST00000624340 592 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 MTND5P33-201ENST00000571250 1450 ntBASIC3.98□□□□□ -1.77
VPS52Q8N1B4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
VPS52Q8N1B4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 Y_RNA.46-201ENST00000362695 102 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 Y_RNA.548-201ENST00000384656 105 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 SNORA40.3-201ENST00000390964 122 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 RPS20P2-201ENST00000402520 389 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 Z98941.1-201ENST00000407764 100 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC009237.5-201ENST00000414271 501 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 RPS7P15-201ENST00000415804 584 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC098824.1-201ENST00000453565 980 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AL033528.1-201ENST00000453780 140 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AP1S2P1-201ENST00000457344 379 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC021382.1-201ENST00000483523 359 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 NIPA2P2-201ENST00000496376 1083 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC109464.2-201ENST00000510242 943 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 RNU6-201P-201ENST00000517100 61 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC022880.1-201ENST00000534017 973 ntBASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS52Q8N1B4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms