Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SETP11-201ENST00000473027 690 ntBASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AC009901.1-201ENST00000506703 541 ntBASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AC113420.1-201ENST00000507903 571 ntBASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AC091826.1-201ENST00000514065 313 ntBASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 RNU6-583P-201ENST00000516012 92 ntBASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AC087373.1-201ENST00000524920 491 ntBASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AC005832.3-201ENST00000537929 631 ntBASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 YWHAZP1-201ENST00000556286 722 ntBASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 MIR5004-201ENST00000579078 107 ntBASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 MIR3944-201ENST00000581277 108 ntBASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 VN1R78P-201ENST00000597393 564 ntBASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AC024220.1-201ENST00000603675 484 ntBASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AF129408.1-201ENST00000608767 431 ntBASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 CRYM-AS1-204ENST00000637983 556 ntBASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 MTND5P1-201ENST00000445440 1375 ntBASIC2.74□□□□□ -1.97
NUDCD3Q8IVD9 AC096644.4-201ENST00000563417 2912 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AC006378.2-201ENST00000623178 2476 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 FRG1BP-201ENST00000278882 761 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 RNU5E-10P-201ENST00000363506 118 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 SNORD116-12-201ENST00000384468 92 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AL590084.1-201ENST00000407885 387 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 RNF2P1-201ENST00000442955 1010 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 RPL23AP20-201ENST00000447965 421 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 ST13P20-201ENST00000447996 1065 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 RPL18AP17-201ENST00000455326 198 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 RPS3AP43-201ENST00000479743 781 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AC006445.1-201ENST00000491925 405 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 RN7SL504P-201ENST00000494496 287 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AL358832.1-201ENST00000497800 389 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 TBCAP3-201ENST00000512475 312 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AC008837.2-201ENST00000513076 418 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AC017037.2-201ENST00000513850 890 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AC093677.1-201ENST00000514414 678 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 RNY4P37-201ENST00000516225 96 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 OR10V3P-201ENST00000525712 725 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AC138761.3-201ENST00000579993 334 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AL390208.1-201ENST00000605885 644 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AP002826.1-201ENST00000608835 315 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AL138478.1-201ENST00000612252 832 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 AL121895.2-201ENST00000619558 447 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 MIR3651-201ENST00000630427 90 ntBASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
NUDCD3Q8IVD9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 SNORA38.1-201ENST00000364172 131 ntBASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 RNU6-1176P-201ENST00000390955 107 ntBASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 AL031679.1-201ENST00000400616 525 ntBASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 MTND4P13-201ENST00000402078 1023 ntBASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 HMGB1P17-201ENST00000403495 628 ntBASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 RNA5SP80-201ENST00000410475 111 ntBASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 THAP5P1-201ENST00000439089 262 ntBASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 MTCO1P53-201ENST00000441633 699 ntBASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 AL121871.1-201ENST00000443413 436 ntBASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 AC104978.1-201ENST00000449387 391 ntBASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.72□□□□□ -1.97
NUDCD3Q8IVD9 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms