Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 DDX43P2-201ENST00000604753 1354 ntBASIC1.22□□□□□ -2.21
VPS13CQ709C8 SGO1P2-201ENST00000429458 1589 ntBASIC1.21□□□□□ -2.22
VPS13CQ709C8 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.21□□□□□ -2.22
VPS13CQ709C8 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.21□□□□□ -2.22
VPS13CQ709C8 AC087468.1-201ENST00000604365 630 ntBASIC1.21□□□□□ -2.22
VPS13CQ709C8 AC090970.3-201ENST00000612566 866 ntBASIC1.21□□□□□ -2.22
VPS13CQ709C8 AL627230.5-201ENST00000619807 58 ntBASIC1.21□□□□□ -2.22
VPS13CQ709C8 AP001486.2-201ENST00000561652 5113 ntBASIC1.21□□□□□ -2.22
VPS13CQ709C8 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
VPS13CQ709C8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
VPS13CQ709C8 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.21□□□□□ -2.22
VPS13CQ709C8 AC022790.1-201ENST00000522872 204 ntBASIC1.21□□□□□ -2.22
VPS13CQ709C8 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
VPS13CQ709C8 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS13CQ709C8 AC023825.1-201ENST00000566704 1030 ntBASIC1.21□□□□□ -2.22
VPS13CQ709C8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
VPS13CQ709C8 RPL17P12-201ENST00000413391 526 ntBASIC1.21□□□□□ -2.22
VPS13CQ709C8 MTCYBP45-201ENST00000435243 565 ntBASIC1.21□□□□□ -2.22
VPS13CQ709C8 TPRKBP1-201ENST00000456243 481 ntBASIC1.21□□□□□ -2.22
VPS13CQ709C8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
VPS13CQ709C8 SNORA31.11-201ENST00000516528 139 ntBASIC1.21□□□□□ -2.22
VPS13CQ709C8 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS13CQ709C8 AC096720.1-201ENST00000604441 183 ntBASIC1.21□□□□□ -2.22
VPS13CQ709C8 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.21□□□□□ -2.22
VPS13CQ709C8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
VPS13CQ709C8 MIR517C-201ENST00000385103 95 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 AC023128.2-201ENST00000420880 1223 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS13CQ709C8 SNORA31.24-201ENST00000517232 57 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS13CQ709C8 AC034268.2-201ENST00000571784 482 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 SNORA40.6-201ENST00000391153 128 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 RPS3AP44-201ENST00000425466 790 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 SETP8-201ENST00000435341 628 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 THAP5P1-201ENST00000439089 262 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 HMGB1P26-201ENST00000452520 628 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
VPS13CQ709C8 RPS26P24-201ENST00000497656 331 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 ATG10-AS1-201ENST00000504846 648 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 MTCO3P44-201ENST00000510977 541 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
VPS13CQ709C8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS13CQ709C8 MIR373-201ENST00000362273 69 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 RNA5SP62-201ENST00000363457 110 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
VPS13CQ709C8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS13CQ709C8 MTCYBP35-201ENST00000503630 1137 ntBASIC1.2□□□□□ -2.22
VPS13CQ709C8 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS13CQ709C8 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS13CQ709C8 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS13CQ709C8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
VPS13CQ709C8 SNORA70.7-201ENST00000384159 133 ntBASIC1.19□□□□□ -2.22
VPS13CQ709C8 RPL21P2-201ENST00000440049 481 ntBASIC1.19□□□□□ -2.22
VPS13CQ709C8 AL162388.1-201ENST00000450912 352 ntBASIC1.19□□□□□ -2.22
VPS13CQ709C8 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS13CQ709C8 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.19□□□□□ -2.22
VPS13CQ709C8 RPS29P20-201ENST00000489592 171 ntBASIC1.19□□□□□ -2.22
VPS13CQ709C8 SULT1C2P1-202ENST00000562418 459 ntBASIC1.19□□□□□ -2.22
VPS13CQ709C8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
VPS13CQ709C8 AC007256.1-201ENST00000392253 2765 ntBASIC1.19□□□□□ -2.22
VPS13CQ709C8 SNORA16.1-201ENST00000364597 132 ntBASIC1.19□□□□□ -2.22
VPS13CQ709C8 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VPS13CQ709C8 MCTS2P-201ENST00000394552 546 ntBASIC1.19□□□□□ -2.22
VPS13CQ709C8 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS13CQ709C8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.19□□□□□ -2.22
VPS13CQ709C8 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.19□□□□□ -2.22
VPS13CQ709C8 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.19□□□□□ -2.22
VPS13CQ709C8 AP002345.1-201ENST00000456493 928 ntBASIC1.19□□□□□ -2.22
VPS13CQ709C8 AC087190.1-201ENST00000484462 480 ntBASIC1.19□□□□□ -2.22
VPS13CQ709C8 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS13CQ709C8 FABP5P5-201ENST00000515537 406 ntBASIC1.19□□□□□ -2.22
VPS13CQ709C8 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.19□□□□□ -2.22
VPS13CQ709C8 TRAV28-201ENST00000557548 323 ntBASIC1.19□□□□□ -2.22
VPS13CQ709C8 AC068135.2-201ENST00000569293 1028 ntBASIC1.19□□□□□ -2.22
VPS13CQ709C8 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.18□□□□□ -2.22
VPS13CQ709C8 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS13CQ709C8 SNRPEP2-201ENST00000397592 279 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS13CQ709C8 WARS2P1-201ENST00000429678 537 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS13CQ709C8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
VPS13CQ709C8 AC008127.2-201ENST00000549925 1075 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 AC008687.2-201ENST00000597865 520 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 ZNF271P-202ENST00000465539 1970 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
VPS13CQ709C8 U8.1-201ENST00000362843 134 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS13CQ709C8 AC021087.2-201ENST00000504656 1203 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 FABP5P6-201ENST00000510588 409 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 RNU6-405P-201ENST00000516637 110 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 RNU6-467P-201ENST00000517027 110 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.18□□□□□ -2.22
VPS13CQ709C8 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS13CQ709C8 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS13CQ709C8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
VPS13CQ709C8 MTND5P10-201ENST00000603719 1809 ntBASIC1.18□□□□□ -2.22
VPS13CQ709C8 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS13CQ709C8 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms