Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC141Q6ZP82 AC026241.1-201ENST00000517873 2142 ntBASIC2.34□□□□□ -2.03
CCDC141Q6ZP82 AC103710.2-202ENST00000641454 2853 ntBASIC2.34□□□□□ -2.04
CCDC141Q6ZP82 AL391987.6-201ENST00000305671 199 ntBASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 PAICSP7-201ENST00000419829 962 ntBASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 RNA5SP445-201ENST00000515889 115 ntBASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 AC019159.1-201ENST00000605094 187 ntBASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 RMST_6.1-201ENST00000611980 203 ntBASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 BX649567.1-201ENST00000642071 1134 ntBASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 AC010733.2-201ENST00000589496 5702 ntBASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 RNU6-1180P-201ENST00000364935 107 ntBASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 Y_RNA.355-201ENST00000365462 98 ntBASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 ANAPC10P1-201ENST00000395991 556 ntBASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 AL450338.1-201ENST00000407987 512 ntBASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 RPS7P2-201ENST00000435134 607 ntBASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 SNORA31.24-201ENST00000517232 57 ntBASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 MIR3690-201ENST00000580266 75 ntBASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 APOOP1-201ENST00000604695 592 ntBASIC2.33□□□□□ -2.04
CCDC141Q6ZP82 AC093536.2-201ENST00000565257 1406 ntBASIC2.32□□□□□ -2.04
CCDC141Q6ZP82 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC141Q6ZP82 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC141Q6ZP82 MIR517C-201ENST00000385103 95 ntBASIC2.32□□□□□ -2.04
CCDC141Q6ZP82 RNU2-68P-201ENST00000410878 191 ntBASIC2.32□□□□□ -2.04
CCDC141Q6ZP82 AC092798.1-201ENST00000458542 409 ntBASIC2.32□□□□□ -2.04
CCDC141Q6ZP82 RPS15AP36-201ENST00000492022 382 ntBASIC2.32□□□□□ -2.04
CCDC141Q6ZP82 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC141Q6ZP82 AP000790.1-201ENST00000528891 737 ntBASIC2.32□□□□□ -2.04
CCDC141Q6ZP82 AC125611.2-201ENST00000551907 647 ntBASIC2.32□□□□□ -2.04
CCDC141Q6ZP82 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC141Q6ZP82 MIR5694-201ENST00000581190 76 ntBASIC2.32□□□□□ -2.04
CCDC141Q6ZP82 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CCDC141Q6ZP82 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
CCDC141Q6ZP82 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC141Q6ZP82 Y_RNA.116-201ENST00000363292 103 ntBASIC2.31□□□□□ -2.04
CCDC141Q6ZP82 SNORA67.6-201ENST00000391093 99 ntBASIC2.31□□□□□ -2.04
CCDC141Q6ZP82 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC141Q6ZP82 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC141Q6ZP82 SNRPFP4-201ENST00000456366 242 ntBASIC2.31□□□□□ -2.04
CCDC141Q6ZP82 AC090515.1-201ENST00000465295 476 ntBASIC2.31□□□□□ -2.04
CCDC141Q6ZP82 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC141Q6ZP82 RPL21P103-201ENST00000479921 488 ntBASIC2.31□□□□□ -2.04
CCDC141Q6ZP82 RPPH1-2P-201ENST00000516688 293 ntBASIC2.31□□□□□ -2.04
CCDC141Q6ZP82 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC141Q6ZP82 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC141Q6ZP82 AC005539.1-201ENST00000443768 1479 ntBASIC2.3□□□□□ -2.04
CCDC141Q6ZP82 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.3□□□□□ -2.04
CCDC141Q6ZP82 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC141Q6ZP82 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC141Q6ZP82 AC009474.2-201ENST00000451383 136 ntBASIC2.3□□□□□ -2.04
CCDC141Q6ZP82 MTCO2P9-201ENST00000503214 694 ntBASIC2.3□□□□□ -2.04
CCDC141Q6ZP82 RNU6-347P-201ENST00000516658 105 ntBASIC2.3□□□□□ -2.04
CCDC141Q6ZP82 RN7SKP82-201ENST00000516786 223 ntBASIC2.3□□□□□ -2.04
CCDC141Q6ZP82 AC121758.2-201ENST00000553271 193 ntBASIC2.3□□□□□ -2.04
CCDC141Q6ZP82 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC141Q6ZP82 RNA5SP108-201ENST00000605921 117 ntBASIC2.3□□□□□ -2.04
CCDC141Q6ZP82 RPL31P52-201ENST00000407532 367 ntBASIC2.29□□□□□ -2.04
CCDC141Q6ZP82 HMGN2P19-201ENST00000425149 265 ntBASIC2.29□□□□□ -2.04
CCDC141Q6ZP82 SNRPGP9-201ENST00000456025 225 ntBASIC2.29□□□□□ -2.04
CCDC141Q6ZP82 uc_338.20-201ENST00000621563 178 ntBASIC2.29□□□□□ -2.04
CCDC141Q6ZP82 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC141Q6ZP82 Y_RNA.327-201ENST00000365201 102 ntBASIC2.28□□□□□ -2.04
CCDC141Q6ZP82 MIR489-201ENST00000384923 84 ntBASIC2.28□□□□□ -2.04
CCDC141Q6ZP82 MIR1276-201ENST00000408707 83 ntBASIC2.28□□□□□ -2.04
CCDC141Q6ZP82 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC141Q6ZP82 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC141Q6ZP82 MTCO1P42-201ENST00000457379 726 ntBASIC2.28□□□□□ -2.04
CCDC141Q6ZP82 MTCO3P44-201ENST00000510977 541 ntBASIC2.28□□□□□ -2.04
CCDC141Q6ZP82 OR4R1P-201ENST00000529879 463 ntBASIC2.28□□□□□ -2.04
CCDC141Q6ZP82 AC006023.2-201ENST00000609916 167 ntBASIC2.28□□□□□ -2.04
CCDC141Q6ZP82 AC004241.3-201ENST00000611728 517 ntBASIC2.28□□□□□ -2.04
CCDC141Q6ZP82 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC141Q6ZP82 AL356057.2-201ENST00000403318 432 ntBASIC2.27□□□□□ -2.05
CCDC141Q6ZP82 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC141Q6ZP82 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC141Q6ZP82 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC141Q6ZP82 AC009901.1-201ENST00000506703 541 ntBASIC2.27□□□□□ -2.05
CCDC141Q6ZP82 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC141Q6ZP82 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.27□□□□□ -2.05
CCDC141Q6ZP82 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC141Q6ZP82 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC141Q6ZP82 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC141Q6ZP82 LLPHP1-201ENST00000603571 367 ntBASIC2.27□□□□□ -2.05
CCDC141Q6ZP82 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC141Q6ZP82 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC141Q6ZP82 SNORA7.1-201ENST00000363750 139 ntBASIC2.26□□□□□ -2.05
CCDC141Q6ZP82 HMGN2P38-201ENST00000423806 265 ntBASIC2.26□□□□□ -2.05
CCDC141Q6ZP82 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms