Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 DUXAP3-201ENST00000603616 594 ntBASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 AC092159.4-201ENST00000624944 550 ntBASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 MIR6767-201ENST00000637302 66 ntBASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 AL118496.1-201ENST00000440201 1812 ntBASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 RNU6-1105P-201ENST00000384774 107 ntBASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 MTCYBP7-201ENST00000419540 1134 ntBASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 TPT1P14-201ENST00000448018 505 ntBASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 AC009961.3-201ENST00000449832 765 ntBASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 AC015720.1-201ENST00000565251 277 ntBASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 ZNF192P1-203ENST00000565888 810 ntBASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 AC109446.2-201ENST00000567872 497 ntBASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 U73479.1-201ENST00000618062 168 ntBASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 AC138649.5-201ENST00000637456 137 ntBASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 AP000553.5-201ENST00000641933 54 ntBASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CSPG4Q6UVK1 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
CSPG4Q6UVK1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.34□□□□□ -2.19
CSPG4Q6UVK1 AC009965.2-201ENST00000425328 970 ntBASIC1.34□□□□□ -2.19
CSPG4Q6UVK1 RPL21P2-201ENST00000440049 481 ntBASIC1.34□□□□□ -2.19
CSPG4Q6UVK1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.34□□□□□ -2.19
CSPG4Q6UVK1 RN7SL274P-201ENST00000492268 272 ntBASIC1.34□□□□□ -2.19
CSPG4Q6UVK1 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.34□□□□□ -2.19
CSPG4Q6UVK1 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.34□□□□□ -2.19
CSPG4Q6UVK1 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.34□□□□□ -2.19
CSPG4Q6UVK1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CSPG4Q6UVK1 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
CSPG4Q6UVK1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.34□□□□□ -2.19
CSPG4Q6UVK1 AL031274.2-201ENST00000599419 203 ntBASIC1.34□□□□□ -2.19
CSPG4Q6UVK1 AC034102.8-201ENST00000615146 484 ntBASIC1.34□□□□□ -2.19
CSPG4Q6UVK1 STMN1P1-201ENST00000617809 440 ntBASIC1.34□□□□□ -2.19
CSPG4Q6UVK1 ZNF271P-202ENST00000465539 1970 ntBASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 RNY1P4-201ENST00000384595 115 ntBASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 AC092832.1-201ENST00000422934 400 ntBASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 HMGN2P19-201ENST00000425149 265 ntBASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 MTND1P18-201ENST00000448191 573 ntBASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 AC069528.1-202ENST00000482888 637 ntBASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 RPS15AP36-201ENST00000492022 382 ntBASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 AC021146.7-201ENST00000509604 775 ntBASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 AP001029.3-201ENST00000588063 596 ntBASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 MKKS-204ENST00000639674 192 ntBASIC1.34□□□□□ -2.2
CSPG4Q6UVK1 RNU6-53P-201ENST00000365367 106 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 MTND4P13-201ENST00000402078 1023 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 PAICSP7-201ENST00000419829 962 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 RPL7P31-201ENST00000450192 724 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 AC027673.1-201ENST00000456245 405 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 HAR1A.1-201ENST00000459583 118 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 AC089999.1-201ENST00000460336 374 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 AL158801.5-201ENST00000623123 465 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 RNU6-1320P-201ENST00000390838 107 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 RNU6-1269P-201ENST00000391139 107 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 AC240504.1-201ENST00000395709 845 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 POLHP1-201ENST00000411806 470 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 AC099336.2-201ENST00000422457 254 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 UBE2V2P1-201ENST00000434717 398 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 AC022431.1-201ENST00000450941 438 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 AP002345.1-201ENST00000456493 928 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 RPS15AP1-201ENST00000457423 391 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 RNU6-599P-201ENST00000459383 107 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 RNU6-1193P-201ENST00000459461 107 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 FABP5P6-201ENST00000510588 409 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 RNA5SP337-201ENST00000517007 109 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 AL121821.2-201ENST00000556081 394 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 AC024560.3-201ENST00000608482 349 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 RNU6-368P-201ENST00000620928 107 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 RNU6-538P-201ENST00000622329 107 ntBASIC1.33□□□□□ -2.2
CSPG4Q6UVK1 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CSPG4Q6UVK1 U8.9-201ENST00000365667 134 ntBASIC1.32□□□□□ -2.2
CSPG4Q6UVK1 RNU6-1263P-201ENST00000384601 106 ntBASIC1.32□□□□□ -2.2
CSPG4Q6UVK1 MIR591-201ENST00000385290 95 ntBASIC1.32□□□□□ -2.2
CSPG4Q6UVK1 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.32□□□□□ -2.2
CSPG4Q6UVK1 AC005517.2-201ENST00000424673 553 ntBASIC1.32□□□□□ -2.2
CSPG4Q6UVK1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.32□□□□□ -2.2
CSPG4Q6UVK1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.32□□□□□ -2.2
CSPG4Q6UVK1 SNORD108-201ENST00000459332 71 ntBASIC1.32□□□□□ -2.2
CSPG4Q6UVK1 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.32□□□□□ -2.2
CSPG4Q6UVK1 COX6CP14-201ENST00000469580 174 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms