Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PPP4R4Q6NUP7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
PPP4R4Q6NUP7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PPP4R4Q6NUP7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PPP4R4Q6NUP7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PPP4R4Q6NUP7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PPP4R4Q6NUP7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PPP4R4Q6NUP7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.19□□□□□ -1.74
PPP4R4Q6NUP7 LARP1BP1-201ENST00000506036 1359 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 RPL7P26-201ENST00000333817 754 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 RNU6-181P-201ENST00000363225 107 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 RPS4XP3-201ENST00000398541 413 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 GSTA9P-201ENST00000406231 611 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 Z85995.1-201ENST00000415547 335 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AL590139.1-201ENST00000416267 400 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AL451074.3-201ENST00000437709 472 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 MTND1P34-201ENST00000438556 671 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 CBWD4P-201ENST00000445695 655 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 SNRPGP6-201ENST00000451124 220 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 HMGB3P22-202ENST00000451823 572 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 RPS29P33-201ENST00000456717 146 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AC111000.3-201ENST00000508057 576 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AC017037.1-201ENST00000508460 471 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 TTC39CP1-201ENST00000512513 755 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 RNU6-445P-201ENST00000516949 107 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AL360157.1-201ENST00000565962 87 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AL391646.1-201ENST00000603860 190 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AC008962.1-201ENST00000605729 304 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 HMGB1P50-201ENST00000605814 607 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AC012603.1-201ENST00000606424 528 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AL161734.1-201ENST00000609720 557 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 AC027309.3-201ENST00000623419 351 ntBASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PPP4R4Q6NUP7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 SNORD56.2-201ENST00000363242 71 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 Y_RNA.159-201ENST00000363674 87 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 RNU6-1103P-201ENST00000384150 107 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 RNA5SP332-201ENST00000391063 115 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 RPS4XP9-201ENST00000405151 780 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AC245028.1-201ENST00000423259 256 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AC017083.1-201ENST00000428093 483 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 DNAJC19P7-201ENST00000428811 344 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 C8orf59P1-201ENST00000429930 303 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 RPS15AP9-201ENST00000439856 381 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 ATP5C1P1-201ENST00000441945 895 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AL590664.1-201ENST00000448065 339 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 RN7SL585P-201ENST00000470538 280 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 RPS20P22-201ENST00000473700 357 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 RN7SL812P-201ENST00000493791 279 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AC107401.1-201ENST00000503426 685 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 RN7SKP92-201ENST00000517266 244 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AC069061.3-201ENST00000582254 823 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AL160290.3-201ENST00000604869 165 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 MLECP1-201ENST00000615893 709 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 XIST_intron.1-201ENST00000619444 68 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AP000346.3-201ENST00000622821 210 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AC008785.1-201ENST00000624475 456 ntBASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms