Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 MIR1271-201ENST00000408537 86 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AC074085.1-201ENST00000413598 418 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AL451062.2-201ENST00000427515 271 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 Z82205.1-201ENST00000428456 297 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AL117339.2-201ENST00000430475 180 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 PPIAP3-201ENST00000450588 505 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 FGF7P3-201ENST00000454645 303 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 snoU109.4-201ENST00000458953 143 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 ST13P14-201ENST00000474095 734 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AC005741.1-201ENST00000511094 432 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 RPL39P5-202ENST00000512505 151 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AP001804.3-201ENST00000525146 880 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AC015912.2-201ENST00000571053 181 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AC006270.2-201ENST00000578523 652 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 RN7SL600P-201ENST00000581811 299 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 APOOP1-201ENST00000604695 592 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AL451044.1-201ENST00000604867 238 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AC092807.2-201ENST00000609367 243 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AC093838.1-201ENST00000613014 469 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AC011155.2-201ENST00000623202 216 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AC140479.6-201ENST00000633535 357 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AC055839.1-201ENST00000634467 498 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AC116667.1-201ENST00000604855 2072 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 MIR369-201ENST00000362155 70 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 RNU6-960P-201ENST00000364056 120 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 Y_RNA.212-201ENST00000364177 102 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 SNORA11F-201ENST00000408237 128 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 MIR548K-201ENST00000408406 116 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 RNU6-516P-201ENST00000411381 104 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 EIF4A1P3-201ENST00000411521 244 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 RPS3AP52-201ENST00000435639 297 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 MTND3P2-201ENST00000438452 342 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 PRPS1P1-201ENST00000445305 876 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AC012671.1-201ENST00000451912 203 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AC005008.1-201ENST00000456151 612 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AL163540.1-201ENST00000485382 386 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AL132838.2-201ENST00000492041 314 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 RN7SL691P-201ENST00000494487 301 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AC008958.1-201ENST00000511047 682 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AL163153.1-201ENST00000554223 283 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AC006116.10-201ENST00000591836 581 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 MIR6867-201ENST00000610636 67 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AL390240.1-201ENST00000612950 384 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AC040896.1-201ENST00000613819 479 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AC091925.2-201ENST00000625059 256 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AC244517.1-201ENST00000606030 2086 ntBASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USPL1Q5W0Q7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 Y_RNA.445-201ENST00000384168 102 ntBASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 RNU6-754P-201ENST00000391166 107 ntBASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 RNU4-46P-201ENST00000410818 138 ntBASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 AL356095.1-201ENST00000417217 199 ntBASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 RPS12P5-201ENST00000423449 371 ntBASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 AC108751.2-201ENST00000469993 231 ntBASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 RPS27AP1-201ENST00000475545 471 ntBASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 AP002812.1-201ENST00000495378 474 ntBASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 AC017037.2-201ENST00000513850 890 ntBASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 RNU6-27P-201ENST00000516146 107 ntBASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms