Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 MTND5P3-201ENST00000438536 1800 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 RNU1-22P-201ENST00000363334 158 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 AL138799.3-201ENST00000438968 350 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 AL513321.1-201ENST00000441175 761 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 MTCYBP35-201ENST00000503630 1137 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 ATP5EP1-201ENST00000510257 156 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 AC245100.2-201ENST00000454544 1679 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 AC006026.1-201ENST00000444025 1803 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 MIRLET7G-201ENST00000362280 84 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 SNORA16.1-201ENST00000364597 132 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 AL358075.3-201ENST00000426289 226 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 AC244505.5-201ENST00000443639 207 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 AC023813.2-201ENST00000564321 469 ntBASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.06□□□□□ -2.24
VPS13DQ5THJ4 RNU1-93P-201ENST00000364704 169 ntBASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 RMST_6.1-201ENST00000611980 203 ntBASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 MIR4278-201ENST00000636094 69 ntBASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 AC092989.1-201ENST00000481235 277 ntBASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 AC002487.1-201ENST00000604565 994 ntBASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 KATNBL1P1-201ENST00000605192 748 ntBASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 RNU6-1027P-201ENST00000383998 107 ntBASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 UBE2V1P5-201ENST00000440070 405 ntBASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 MTCYBP18-201ENST00000501056 747 ntBASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 AC240504.1-201ENST00000395709 845 ntBASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 AL136133.1-201ENST00000413694 376 ntBASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 MTCYBP7-201ENST00000419540 1134 ntBASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 AL513185.2-201ENST00000425543 193 ntBASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 RNA5SP61-201ENST00000516453 100 ntBASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 AC245036.5-201ENST00000596330 847 ntBASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VPS13DQ5THJ4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 SNORA40.6-201ENST00000391153 128 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 AL365400.1-201ENST00000431854 640 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 RPL23AP41-201ENST00000484754 458 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 AC005156.1-201ENST00000613371 573 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 AL354685.2-201ENST00000448218 1447 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 AC011155.1-201ENST00000316512 456 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 RNU2-25P-201ENST00000411041 191 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 MTCYBP45-201ENST00000435243 565 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 HMGN1P8-201ENST00000463578 288 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 MIR3660-201ENST00000584845 100 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 U73479.1-201ENST00000618062 168 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 Y_RNA.205-201ENST00000364128 113 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 MIR124-3-201ENST00000384866 87 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 MIR320A-201ENST00000385302 82 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 TRAPPC2P10-201ENST00000415662 323 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 UBE2V2P1-201ENST00000434717 398 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 CALM1P2-201ENST00000452941 448 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 AC104307.1-201ENST00000616142 196 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 AC103710.2-202ENST00000641454 2853 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 NR1H5P-201ENST00000452683 1377 ntBASIC1.04□□□□□ -2.24
VPS13DQ5THJ4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 AC009302.1-201ENST00000417147 390 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 TPT1P14-201ENST00000448018 505 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 Z98749.2-208ENST00000381646 500 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 RNU1-109P-201ENST00000383960 147 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 Z75741.2-201ENST00000417272 1167 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 RPL23AP55-201ENST00000498163 452 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 AC104115.2-201ENST00000523026 687 ntBASIC1.03□□□□□ -2.24
VPS13DQ5THJ4 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms