Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.73□□□□□ -1.97
RAB40BQ12829 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.73□□□□□ -1.97
RAB40BQ12829 AC027449.1-201ENST00000608890 407 ntBASIC2.73□□□□□ -1.97
RAB40BQ12829 AC019176.2-201ENST00000611579 315 ntBASIC2.73□□□□□ -1.97
RAB40BQ12829 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RAB40BQ12829 AL392088.2-201ENST00000637607 285 ntBASIC2.73□□□□□ -1.97
RAB40BQ12829 AL035425.3-201ENST00000564206 4996 ntBASIC2.73□□□□□ -1.97
RAB40BQ12829 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
RAB40BQ12829 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RAB40BQ12829 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RAB40BQ12829 AC092447.10-201ENST00000620607 1652 ntBASIC2.73□□□□□ -1.97
RAB40BQ12829 AL355596.1-201ENST00000565399 3996 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.72□□□□□ -1.97
RAB40BQ12829 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.72□□□□□ -1.97
RAB40BQ12829 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RAB40BQ12829 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RAB40BQ12829 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RAB40BQ12829 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RAB40BQ12829 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RAB40BQ12829 SNORD15B-201ENST00000384714 146 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
RAB40BQ12829 RNU6-757P-201ENST00000410334 100 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.72□□□□□ -1.97
RAB40BQ12829 AC083875.1-201ENST00000419509 405 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 PPP1R11P2-201ENST00000423543 382 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.72□□□□□ -1.97
RAB40BQ12829 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.72□□□□□ -1.97
RAB40BQ12829 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.72□□□□□ -1.97
RAB40BQ12829 RPL21P40-201ENST00000428586 483 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
RAB40BQ12829 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.72□□□□□ -1.97
RAB40BQ12829 AL049874.1-201ENST00000489560 388 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 AP001025.2-201ENST00000490908 477 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.72□□□□□ -1.97
RAB40BQ12829 AC110794.1-201ENST00000505816 425 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 SLC25A15P5-201ENST00000508033 253 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 MTND4LP22-201ENST00000508209 276 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.72□□□□□ -1.97
RAB40BQ12829 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.72□□□□□ -1.97
RAB40BQ12829 AC239860.2-201ENST00000525886 270 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 AP003497.1-201ENST00000528472 562 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RAB40BQ12829 OR4H12P-201ENST00000556269 907 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.72□□□□□ -1.97
RAB40BQ12829 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RAB40BQ12829 AC034268.2-201ENST00000571784 482 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 AC006504.3-201ENST00000586818 523 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 BNIP3P33-201ENST00000598912 569 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 MIR92B-201ENST00000607575 96 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 AC027309.3-201ENST00000623419 351 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.72□□□□□ -1.97
RAB40BQ12829 AC006927.4-201ENST00000639187 543 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 AP000526.1-201ENST00000603308 1388 ntBASIC2.72□□□□□ -1.97
RAB40BQ12829 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
RAB40BQ12829 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
RAB40BQ12829 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
RAB40BQ12829 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RAB40BQ12829 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RAB40BQ12829 RNU5E-8P-201ENST00000363502 116 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 RNA5SP50-201ENST00000363731 107 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 SNORA14A-201ENST00000364773 135 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 RNU6-83P-201ENST00000384568 112 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 RNU6-114P-201ENST00000384704 105 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 MIR513B-201ENST00000385136 84 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 MIR181B1-201ENST00000385240 110 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 MIR320C1-201ENST00000408566 88 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.71□□□□□ -1.98
RAB40BQ12829 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.71□□□□□ -1.98
RAB40BQ12829 AL389915.1-201ENST00000422463 466 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.71□□□□□ -1.98
RAB40BQ12829 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.71□□□□□ -1.98
RAB40BQ12829 DPPA2P1-201ENST00000428060 556 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 CR769776.1-201ENST00000441254 787 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 AC112653.1-201ENST00000443851 386 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.71□□□□□ -1.98
RAB40BQ12829 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.71□□□□□ -1.98
RAB40BQ12829 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.71□□□□□ -1.98
RAB40BQ12829 RPL21P8-201ENST00000465083 535 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.71□□□□□ -1.98
RAB40BQ12829 AC006445.2-201ENST00000510061 472 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 MTCYBP43-201ENST00000513621 740 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 RNA5SP216-201ENST00000516111 123 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 RNU6-798P-201ENST00000516912 103 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.71□□□□□ -1.98
RAB40BQ12829 OR5G4P-201ENST00000525251 760 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 CASP1P1-201ENST00000526345 212 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.71□□□□□ -1.98
RAB40BQ12829 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.71□□□□□ -1.98
RAB40BQ12829 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.71□□□□□ -1.98
RAB40BQ12829 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.71□□□□□ -1.98
RAB40BQ12829 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RAB40BQ12829 AC034105.3-201ENST00000565294 442 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.71□□□□□ -1.98
RAB40BQ12829 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.71□□□□□ -1.98
RAB40BQ12829 AL031985.2-201ENST00000600955 480 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 PRELID3BP8-201ENST00000604148 295 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 HSPE1P7-201ENST00000604681 321 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 AC100793.4-201ENST00000613683 429 ntBASIC2.71□□□□□ -1.98
RAB40BQ12829 AL392048.1-201ENST00000613946 534 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms