Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
TFF3Q07654 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
TFF3Q07654 AL359851.1-201ENST00000569460 4997 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 ZNF876P-202ENST00000398732 1485 ntBASIC1.43□□□□□ -2.18
TFF3Q07654 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.42□□□□□ -2.18
TFF3Q07654 AC004520.1-201ENST00000608362 1413 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
TFF3Q07654 UBE2L2-201ENST00000254302 429 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.42□□□□□ -2.18
TFF3Q07654 Y_RNA.269-201ENST00000364685 89 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 SNORA6-201ENST00000384033 151 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 AL121972.1-201ENST00000402023 252 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 AL450338.1-201ENST00000407987 512 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 RNU2-68P-201ENST00000410878 191 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 AC234782.4-201ENST00000417646 1048 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 TOMM22P1-201ENST00000418578 312 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 HMGB1P12-201ENST00000438594 598 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 BNIP3P2-201ENST00000441221 577 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 VN1R96P-201ENST00000446052 858 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.42□□□□□ -2.18
TFF3Q07654 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.42□□□□□ -2.18
TFF3Q07654 AC021146.7-201ENST00000509604 775 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.42□□□□□ -2.18
TFF3Q07654 AC006499.2-201ENST00000513470 337 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.42□□□□□ -2.18
TFF3Q07654 OR4P1P-201ENST00000530808 1136 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 SNORD53B-201ENST00000577887 78 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 MIR3618-201ENST00000580330 88 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 AC006249.1-201ENST00000621223 471 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 AC012150.2-201ENST00000621300 544 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 AL353748.2-201ENST00000622148 471 ntBASIC1.42□□□□□ -2.18
TFF3Q07654 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TFF3Q07654 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TFF3Q07654 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
TFF3Q07654 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.41□□□□□ -2.18
TFF3Q07654 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
TFF3Q07654 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
TFF3Q07654 AL391987.6-201ENST00000305671 199 ntBASIC1.41□□□□□ -2.18
TFF3Q07654 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
TFF3Q07654 Y_RNA.327-201ENST00000365201 102 ntBASIC1.41□□□□□ -2.18
TFF3Q07654 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.41□□□□□ -2.18
TFF3Q07654 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.41□□□□□ -2.18
TFF3Q07654 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.41□□□□□ -2.18
TFF3Q07654 HMGN2P16-201ENST00000456802 261 ntBASIC1.41□□□□□ -2.18
TFF3Q07654 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.41□□□□□ -2.18
TFF3Q07654 AC034222.1-201ENST00000494052 532 ntBASIC1.41□□□□□ -2.18
TFF3Q07654 HMGB1P47-201ENST00000511281 589 ntBASIC1.41□□□□□ -2.18
TFF3Q07654 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.41□□□□□ -2.18
TFF3Q07654 AC124283.4-201ENST00000581815 456 ntBASIC1.41□□□□□ -2.18
TFF3Q07654 AC010928.2-201ENST00000588017 287 ntBASIC1.41□□□□□ -2.18
TFF3Q07654 AC018754.1-201ENST00000607486 925 ntBASIC1.41□□□□□ -2.18
TFF3Q07654 AL589994.2-201ENST00000621124 579 ntBASIC1.41□□□□□ -2.18
TFF3Q07654 MIR203B-201ENST00000636080 86 ntBASIC1.41□□□□□ -2.18
TFF3Q07654 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.41□□□□□ -2.18
TFF3Q07654 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
TFF3Q07654 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.18
TFF3Q07654 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
TFF3Q07654 AC138915.1-201ENST00000565427 1685 ntBASIC1.4□□□□□ -2.19
TFF3Q07654 Y_RNA.116-201ENST00000363292 103 ntBASIC1.4□□□□□ -2.19
TFF3Q07654 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.4□□□□□ -2.19
TFF3Q07654 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.4□□□□□ -2.19
TFF3Q07654 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.4□□□□□ -2.19
TFF3Q07654 ARPC3P1-201ENST00000437218 533 ntBASIC1.4□□□□□ -2.19
TFF3Q07654 Z73417.1-201ENST00000447373 778 ntBASIC1.4□□□□□ -2.19
TFF3Q07654 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.4□□□□□ -2.19
TFF3Q07654 OR7L1P-201ENST00000456181 380 ntBASIC1.4□□□□□ -2.19
TFF3Q07654 RPS27P21-201ENST00000486977 252 ntBASIC1.4□□□□□ -2.19
TFF3Q07654 CDC42P4-201ENST00000510507 563 ntBASIC1.4□□□□□ -2.19
TFF3Q07654 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TFF3Q07654 MIR514B-201ENST00000516774 80 ntBASIC1.4□□□□□ -2.19
TFF3Q07654 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC1.4□□□□□ -2.19
TFF3Q07654 AL138976.2-201ENST00000563989 694 ntBASIC1.4□□□□□ -2.19
TFF3Q07654 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.4□□□□□ -2.19
TFF3Q07654 AL512643.1-201ENST00000635735 524 ntBASIC1.4□□□□□ -2.19
TFF3Q07654 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.4□□□□□ -2.19
TFF3Q07654 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TFF3Q07654 Y_RNA.118-201ENST00000363300 101 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 RNU1-52P-201ENST00000384190 164 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 AL035405.1-201ENST00000400795 710 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 MIR1276-201ENST00000408707 83 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 RPL26P37-201ENST00000411983 438 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.39□□□□□ -2.19
TFF3Q07654 BX510359.4-201ENST00000423750 193 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.39□□□□□ -2.19
TFF3Q07654 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.39□□□□□ -2.19
TFF3Q07654 AL121871.1-201ENST00000443413 436 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 CASP3P1-201ENST00000446037 609 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.39□□□□□ -2.19
TFF3Q07654 AC009474.2-201ENST00000451383 136 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.39□□□□□ -2.19
TFF3Q07654 AC079203.1-201ENST00000487972 404 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.39□□□□□ -2.19
TFF3Q07654 RNU2-44P-201ENST00000516795 194 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.39□□□□□ -2.19
TFF3Q07654 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.39□□□□□ -2.19
TFF3Q07654 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
TFF3Q07654 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms