Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
ABCA4P78363 AC010680.1-201ENST00000590024 3590 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ABCA4P78363 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.64□□□□□ -2.15
ABCA4P78363 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
ABCA4P78363 RNA5SP139-201ENST00000364340 117 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 MIR1276-201ENST00000408707 83 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 RNU2-21P-201ENST00000410368 188 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.64□□□□□ -2.15
ABCA4P78363 RPS6P14-201ENST00000425165 719 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 RPL21P2-201ENST00000440049 481 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.64□□□□□ -2.15
ABCA4P78363 AL590664.1-201ENST00000448065 339 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ABCA4P78363 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.64□□□□□ -2.15
ABCA4P78363 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.64□□□□□ -2.15
ABCA4P78363 AC025881.1-201ENST00000518851 512 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.64□□□□□ -2.15
ABCA4P78363 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.64□□□□□ -2.15
ABCA4P78363 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.64□□□□□ -2.15
ABCA4P78363 AP000787.2-201ENST00000604432 568 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
ABCA4P78363 ZNF720P1-201ENST00000562403 1939 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 AL355578.1-201ENST00000607405 1328 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ABCA4P78363 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ABCA4P78363 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
ABCA4P78363 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ABCA4P78363 RNA5SP190-201ENST00000365222 118 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 CD24P4-201ENST00000382840 243 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 RPS4XP3-201ENST00000398541 413 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 RNU2-68P-201ENST00000410878 191 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.64□□□□□ -2.15
ABCA4P78363 RPS26P56-201ENST00000444468 240 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.64□□□□□ -2.15
ABCA4P78363 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
ABCA4P78363 AC010301.1-201ENST00000473936 355 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 NCOR1P1-202ENST00000486162 291 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 AC111193.1-201ENST00000504097 155 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 AC004062.1-201ENST00000509926 645 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.64□□□□□ -2.15
ABCA4P78363 AC008083.2-201ENST00000546707 476 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.64□□□□□ -2.15
ABCA4P78363 DNAJC19P9-201ENST00000555084 351 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
ABCA4P78363 AP005136.1-201ENST00000579765 429 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 AP001542.2-201ENST00000593141 364 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 BX248123.2-201ENST00000606318 124 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 AL109809.4-201ENST00000603520 2185 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 ZNF519P1-201ENST00000449011 1626 ntBASIC1.64□□□□□ -2.15
ABCA4P78363 AC135776.4-201ENST00000624300 1904 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
ABCA4P78363 AC244517.1-201ENST00000606030 2086 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 RNA5SP391-201ENST00000363456 119 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.63□□□□□ -2.15
ABCA4P78363 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.63□□□□□ -2.15
ABCA4P78363 SDR42E1P3-201ENST00000438345 502 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 RPL23AP20-201ENST00000447965 421 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 AC010285.1-201ENST00000470580 392 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 RPL23AP55-201ENST00000498163 452 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 GTF2IP9-201ENST00000502460 301 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.63□□□□□ -2.15
ABCA4P78363 ARL4AP2-201ENST00000507378 601 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 TRMT112P2-201ENST00000512910 132 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 AC133963.2-201ENST00000513686 578 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.63□□□□□ -2.15
ABCA4P78363 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.63□□□□□ -2.15
ABCA4P78363 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.63□□□□□ -2.15
ABCA4P78363 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.63□□□□□ -2.15
ABCA4P78363 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.63□□□□□ -2.15
ABCA4P78363 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
ABCA4P78363 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.63□□□□□ -2.15
ABCA4P78363 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.63□□□□□ -2.15
ABCA4P78363 AC023512.1-201ENST00000444513 499 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 RPL31P20-201ENST00000449593 360 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.63□□□□□ -2.15
ABCA4P78363 SNORD116-30-201ENST00000516468 85 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.63□□□□□ -2.15
ABCA4P78363 MIR4452-201ENST00000583004 71 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 MIR4448-201ENST00000584360 86 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.63□□□□□ -2.15
ABCA4P78363 DUXAP3-201ENST00000603616 594 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 APOOP1-201ENST00000604695 592 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 AC018755.4-201ENST00000619715 454 ntBASIC1.63□□□□□ -2.15
ABCA4P78363 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.63□□□□□ -2.15
ABCA4P78363 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
ABCA4P78363 AC092881.1-201ENST00000638218 2733 ntBASIC1.62□□□□□ -2.15
ABCA4P78363 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.62□□□□□ -2.15
ABCA4P78363 RNU6-1181P-201ENST00000384191 106 ntBASIC1.62□□□□□ -2.15
ABCA4P78363 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
ABCA4P78363 HMGN2P35-201ENST00000412164 270 ntBASIC1.62□□□□□ -2.15
ABCA4P78363 MTCO3P30-201ENST00000426425 670 ntBASIC1.62□□□□□ -2.15
ABCA4P78363 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.62□□□□□ -2.15
ABCA4P78363 RPS26P21-201ENST00000475397 348 ntBASIC1.62□□□□□ -2.15
ABCA4P78363 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.62□□□□□ -2.15
ABCA4P78363 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
ABCA4P78363 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.62□□□□□ -2.15
ABCA4P78363 AP000790.1-201ENST00000528891 737 ntBASIC1.62□□□□□ -2.15
ABCA4P78363 OSBPL9P3-201ENST00000534523 595 ntBASIC1.62□□□□□ -2.15
ABCA4P78363 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms