Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RN7SKP179-201ENST00000516126 217 ntBASIC0.9□□□□□ -2.27
RPL39P62891 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.9□□□□□ -2.27
RPL39P62891 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.9□□□□□ -2.27
RPL39P62891 HSBP1P1-201ENST00000555205 166 ntBASIC0.9□□□□□ -2.27
RPL39P62891 NRBF2P1-201ENST00000587407 859 ntBASIC0.9□□□□□ -2.27
RPL39P62891 AC245036.5-201ENST00000596330 847 ntBASIC0.9□□□□□ -2.27
RPL39P62891 AL050343.2-201ENST00000607338 280 ntBASIC0.9□□□□□ -2.27
RPL39P62891 AC091953.2-201ENST00000623979 160 ntBASIC0.9□□□□□ -2.27
RPL39P62891 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC0.9□□□□□ -2.27
RPL39P62891 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
RPL39P62891 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
RPL39P62891 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
RPL39P62891 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
RPL39P62891 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.89□□□□□ -2.27
RPL39P62891 PAICSP7-201ENST00000419829 962 ntBASIC0.89□□□□□ -2.27
RPL39P62891 RPL30P3-201ENST00000424262 333 ntBASIC0.89□□□□□ -2.27
RPL39P62891 ARF4P4-201ENST00000439608 520 ntBASIC0.89□□□□□ -2.27
RPL39P62891 COX6CP12-201ENST00000446748 202 ntBASIC0.89□□□□□ -2.27
RPL39P62891 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.89□□□□□ -2.27
RPL39P62891 RNU1-123P-201ENST00000458950 160 ntBASIC0.89□□□□□ -2.27
RPL39P62891 RNU1-98P-201ENST00000458992 160 ntBASIC0.89□□□□□ -2.27
RPL39P62891 AC008481.1-201ENST00000463278 396 ntBASIC0.89□□□□□ -2.27
RPL39P62891 FAM172BP-201ENST00000487497 1089 ntBASIC0.89□□□□□ -2.27
RPL39P62891 AC096751.1-202ENST00000502691 1067 ntBASIC0.89□□□□□ -2.27
RPL39P62891 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.89□□□□□ -2.27
RPL39P62891 MTCO3P44-201ENST00000510977 541 ntBASIC0.89□□□□□ -2.27
RPL39P62891 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.89□□□□□ -2.27
RPL39P62891 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.89□□□□□ -2.27
RPL39P62891 HMGB1P46-201ENST00000520062 610 ntBASIC0.89□□□□□ -2.27
RPL39P62891 AC022634.1-201ENST00000520765 532 ntBASIC0.89□□□□□ -2.27
RPL39P62891 OSBPL9P3-201ENST00000534523 595 ntBASIC0.89□□□□□ -2.27
RPL39P62891 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
RPL39P62891 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
RPL39P62891 C1GALT1P1-201ENST00000548895 1089 ntBASIC0.89□□□□□ -2.27
RPL39P62891 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
RPL39P62891 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC0.89□□□□□ -2.27
RPL39P62891 AL442163.2-201ENST00000553912 710 ntBASIC0.89□□□□□ -2.27
RPL39P62891 AL160236.1-201ENST00000556317 195 ntBASIC0.89□□□□□ -2.27
RPL39P62891 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC0.89□□□□□ -2.27
RPL39P62891 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.89□□□□□ -2.27
RPL39P62891 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC0.89□□□□□ -2.27
RPL39P62891 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.89□□□□□ -2.27
RPL39P62891 AC107214.2-201ENST00000608204 634 ntBASIC0.89□□□□□ -2.27
RPL39P62891 RMST_6.1-201ENST00000611980 203 ntBASIC0.89□□□□□ -2.27
RPL39P62891 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.89□□□□□ -2.27
RPL39P62891 AC025016.1-201ENST00000616746 682 ntBASIC0.89□□□□□ -2.27
RPL39P62891 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
RPL39P62891 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
RPL39P62891 BX649567.1-201ENST00000642071 1134 ntBASIC0.89□□□□□ -2.27
RPL39P62891 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.89□□□□□ -2.27
RPL39P62891 MTND5P28-201ENST00000438005 1594 ntBASIC0.88□□□□□ -2.27
RPL39P62891 RNU6-600P-201ENST00000362524 99 ntBASIC0.88□□□□□ -2.27
RPL39P62891 SNORA70B-201ENST00000384210 135 ntBASIC0.88□□□□□ -2.27
RPL39P62891 AL033519.2-201ENST00000403958 392 ntBASIC0.88□□□□□ -2.27
RPL39P62891 MIR1285-1-201ENST00000408593 84 ntBASIC0.88□□□□□ -2.27
RPL39P62891 MTND5P25-201ENST00000430499 799 ntBASIC0.88□□□□□ -2.27
RPL39P62891 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
RPL39P62891 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.88□□□□□ -2.27
RPL39P62891 DNAJC19P8-201ENST00000452887 259 ntBASIC0.88□□□□□ -2.27
RPL39P62891 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.88□□□□□ -2.27
RPL39P62891 SNORD13-201ENST00000459299 104 ntBASIC0.88□□□□□ -2.27
RPL39P62891 AC021205.1-201ENST00000468797 348 ntBASIC0.88□□□□□ -2.27
RPL39P62891 UBE2DNL-203ENST00000474922 222 ntBASIC0.88□□□□□ -2.27
RPL39P62891 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
RPL39P62891 AC098799.1-201ENST00000504752 800 ntBASIC0.88□□□□□ -2.27
RPL39P62891 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.88□□□□□ -2.27
RPL39P62891 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.88□□□□□ -2.27
RPL39P62891 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC0.88□□□□□ -2.27
RPL39P62891 RN7SL371P-201ENST00000578099 267 ntBASIC0.88□□□□□ -2.27
RPL39P62891 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.88□□□□□ -2.27
RPL39P62891 AL109918.3-201ENST00000603072 338 ntBASIC0.88□□□□□ -2.27
RPL39P62891 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
RPL39P62891 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
RPL39P62891 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.87□□□□□ -2.27
RPL39P62891 RNU6-525P-201ENST00000363685 104 ntBASIC0.87□□□□□ -2.27
RPL39P62891 SNORA51.2-201ENST00000364595 132 ntBASIC0.87□□□□□ -2.27
RPL39P62891 RPL31P52-201ENST00000407532 367 ntBASIC0.87□□□□□ -2.27
RPL39P62891 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC0.87□□□□□ -2.27
RPL39P62891 UBE2FP1-201ENST00000416536 447 ntBASIC0.87□□□□□ -2.27
RPL39P62891 CYCSP49-201ENST00000420810 319 ntBASIC0.87□□□□□ -2.27
RPL39P62891 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC0.87□□□□□ -2.27
RPL39P62891 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.87□□□□□ -2.27
RPL39P62891 AL356867.1-201ENST00000429623 299 ntBASIC0.87□□□□□ -2.27
RPL39P62891 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.87□□□□□ -2.27
RPL39P62891 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.87□□□□□ -2.27
RPL39P62891 AC005410.1-202ENST00000460347 485 ntBASIC0.87□□□□□ -2.27
RPL39P62891 AC097493.1-201ENST00000463958 372 ntBASIC0.87□□□□□ -2.27
RPL39P62891 AC004223.1-201ENST00000479840 271 ntBASIC0.87□□□□□ -2.27
RPL39P62891 RPS15AP36-201ENST00000492022 382 ntBASIC0.87□□□□□ -2.27
RPL39P62891 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
RPL39P62891 AC108120.2-201ENST00000512973 294 ntBASIC0.87□□□□□ -2.27
RPL39P62891 RNU6-970P-201ENST00000516312 107 ntBASIC0.87□□□□□ -2.27
RPL39P62891 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.87□□□□□ -2.27
RPL39P62891 MIR4513-201ENST00000581077 86 ntBASIC0.87□□□□□ -2.27
RPL39P62891 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.87□□□□□ -2.27
RPL39P62891 AC090616.3-201ENST00000582184 217 ntBASIC0.87□□□□□ -2.27
RPL39P62891 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.87□□□□□ -2.27
RPL39P62891 AL592494.3-201ENST00000609485 464 ntBASIC0.87□□□□□ -2.27
RPL39P62891 VN1R9P-201ENST00000614184 867 ntBASIC0.87□□□□□ -2.27
RPL39P62891 AC123768.4-201ENST00000616244 701 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms