Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RHBDL3P58872 TPTE2P4-201ENST00000258589 1605 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RHBDL3P58872 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
RHBDL3P58872 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHBDL3P58872 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.31□□□□□ -1.72
RHBDL3P58872 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RHBDL3P58872 RNU5F-6P-201ENST00000362979 116 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 RNU5A-8P-201ENST00000364102 114 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 SNORD74.4-201ENST00000364129 80 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 RNA5SP72-201ENST00000364442 117 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 RNA5SP104-201ENST00000410989 118 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 RPL17P12-201ENST00000413391 526 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.31□□□□□ -1.72
RHBDL3P58872 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.31□□□□□ -1.72
RHBDL3P58872 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.31□□□□□ -1.72
RHBDL3P58872 FTH1P1-201ENST00000437933 532 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.31□□□□□ -1.72
RHBDL3P58872 AC009237.8-201ENST00000445492 379 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.31□□□□□ -1.72
RHBDL3P58872 SNRPFP4-201ENST00000456366 242 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.31□□□□□ -1.72
RHBDL3P58872 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.31□□□□□ -1.72
RHBDL3P58872 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.31□□□□□ -1.72
RHBDL3P58872 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.31□□□□□ -1.72
RHBDL3P58872 AC007834.2-201ENST00000536310 343 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.31□□□□□ -1.72
RHBDL3P58872 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.31□□□□□ -1.72
RHBDL3P58872 MIR5047-201ENST00000579212 100 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 AC008088.1-201ENST00000580993 280 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 WISP1-OT1-201ENST00000602893 642 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 AC006077.1-201ENST00000604746 343 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 SDR42E1P2-201ENST00000614861 481 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 AC097655.1-201ENST00000635075 318 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHBDL3P58872 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.31□□□□□ -1.72
RHBDL3P58872 BDP1P-201ENST00000582658 1990 ntBASIC4.31□□□□□ -1.72
RHBDL3P58872 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHBDL3P58872 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RHBDL3P58872 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.3□□□□□ -1.72
RHBDL3P58872 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
RHBDL3P58872 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.3□□□□□ -1.72
RHBDL3P58872 Y_RNA.46-201ENST00000362695 102 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 AC017079.2-201ENST00000416102 485 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 HMGB3P20-201ENST00000417997 600 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 AC006366.1-201ENST00000422002 759 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 USP12PX-201ENST00000432383 1057 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RHBDL3P58872 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.3□□□□□ -1.72
RHBDL3P58872 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.3□□□□□ -1.72
RHBDL3P58872 CYCSP35-201ENST00000451978 304 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 AC008481.1-201ENST00000463278 396 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.3□□□□□ -1.72
RHBDL3P58872 AC092754.2-201ENST00000463506 460 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RHBDL3P58872 AL358832.1-201ENST00000497800 389 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.3□□□□□ -1.72
RHBDL3P58872 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.3□□□□□ -1.72
RHBDL3P58872 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 MIR2114-201ENST00000516645 80 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 AC025881.1-201ENST00000518851 512 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 MTND2P38-201ENST00000522536 667 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 OSBPL9P5-201ENST00000542581 171 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.3□□□□□ -1.72
RHBDL3P58872 AC012150.2-201ENST00000621300 544 ntBASIC4.3□□□□□ -1.72
RHBDL3P58872 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RHBDL3P58872 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RHBDL3P58872 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RHBDL3P58872 PABPC1P9-201ENST00000426076 1612 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RHBDL3P58872 RNU1-33P-201ENST00000364249 162 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 RNA5SP267-201ENST00000364893 126 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.29□□□□□ -1.72
RHBDL3P58872 RNU6-809P-201ENST00000384461 107 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.29□□□□□ -1.72
RHBDL3P58872 JKAMPP1-201ENST00000413804 919 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.29□□□□□ -1.72
RHBDL3P58872 AL353777.1-201ENST00000425552 326 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.29□□□□□ -1.72
RHBDL3P58872 AL049734.2-201ENST00000441066 616 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.29□□□□□ -1.72
RHBDL3P58872 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.29□□□□□ -1.72
RHBDL3P58872 AL359385.1-201ENST00000456509 365 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.29□□□□□ -1.72
RHBDL3P58872 AC026784.1-201ENST00000507986 352 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 AC100870.1-201ENST00000522035 505 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 OR5G4P-201ENST00000525251 760 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.29□□□□□ -1.72
RHBDL3P58872 AL121766.1-201ENST00000547436 487 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 AC109446.2-201ENST00000567872 497 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 AC135628.1-201ENST00000568867 534 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 AL356432.3-201ENST00000568952 465 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 MIR3186-201ENST00000577404 85 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 MIR3200-201ENST00000580767 85 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 AC025811.1-201ENST00000604312 472 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 AC121334.2-201ENST00000605387 271 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 AC233309.1-201ENST00000619522 751 ntBASIC4.29□□□□□ -1.72
RHBDL3P58872 AC092628.2-201ENST00000622492 339 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms