Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC007014.2-201ENST00000615581 479 ntBASIC3.59□□□□□ -1.83
CDH12P55289 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CDH12P55289 AC006338.1-201ENST00000618453 749 ntBASIC3.59□□□□□ -1.83
CDH12P55289 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH12P55289 AC244205.2-202ENST00000635781 342 ntBASIC3.59□□□□□ -1.83
CDH12P55289 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH12P55289 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH12P55289 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDH12P55289 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.59□□□□□ -1.84
CDH12P55289 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.59□□□□□ -1.84
CDH12P55289 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CDH12P55289 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDH12P55289 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.58□□□□□ -1.84
CDH12P55289 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDH12P55289 OR1S2-201ENST00000302592 978 ntBASIC3.58□□□□□ -1.84
CDH12P55289 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH12P55289 RNU6-1155P-201ENST00000363554 107 ntBASIC3.58□□□□□ -1.84
CDH12P55289 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH12P55289 Y_RNA.450-201ENST00000384198 113 ntBASIC3.58□□□□□ -1.84
CDH12P55289 AL138878.1-201ENST00000405131 347 ntBASIC3.58□□□□□ -1.84
CDH12P55289 CIR1P3-201ENST00000405137 479 ntBASIC3.58□□□□□ -1.84
CDH12P55289 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH12P55289 ELOCP4-201ENST00000420090 333 ntBASIC3.58□□□□□ -1.84
CDH12P55289 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDH12P55289 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH12P55289 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH12P55289 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH12P55289 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH12P55289 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDH12P55289 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH12P55289 SNORA31.9-201ENST00000516429 84 ntBASIC3.58□□□□□ -1.84
CDH12P55289 RN7SKP83-201ENST00000516512 178 ntBASIC3.58□□□□□ -1.84
CDH12P55289 RNA5SP179-201ENST00000517284 121 ntBASIC3.58□□□□□ -1.84
CDH12P55289 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH12P55289 MRPL49P2-201ENST00000521066 465 ntBASIC3.58□□□□□ -1.84
CDH12P55289 SUB1P2-201ENST00000556401 297 ntBASIC3.58□□□□□ -1.84
CDH12P55289 AC234778.2-201ENST00000566241 354 ntBASIC3.58□□□□□ -1.84
CDH12P55289 MIR4644-201ENST00000579929 84 ntBASIC3.58□□□□□ -1.84
CDH12P55289 XIAPP1-201ENST00000603162 600 ntBASIC3.58□□□□□ -1.84
CDH12P55289 AC006254.3-201ENST00000603353 884 ntBASIC3.58□□□□□ -1.84
CDH12P55289 AC091167.4-201ENST00000605079 184 ntBASIC3.58□□□□□ -1.84
CDH12P55289 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH12P55289 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH12P55289 AC004908.2-201ENST00000609090 574 ntBASIC3.58□□□□□ -1.84
CDH12P55289 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH12P55289 AC244258.1-201ENST00000637553 1071 ntBASIC3.58□□□□□ -1.84
CDH12P55289 OR52H1-202ENST00000641796 1061 ntBASIC3.58□□□□□ -1.84
CDH12P55289 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDH12P55289 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDH12P55289 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CDH12P55289 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH12P55289 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH12P55289 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDH12P55289 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH12P55289 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CDH12P55289 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH12P55289 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
CDH12P55289 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CDH12P55289 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH12P55289 HMGN1P24-201ENST00000412282 298 ntBASIC3.57□□□□□ -1.84
CDH12P55289 RPS7P15-201ENST00000415804 584 ntBASIC3.57□□□□□ -1.84
CDH12P55289 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH12P55289 AL353193.1-201ENST00000421444 268 ntBASIC3.57□□□□□ -1.84
CDH12P55289 BEND7P1-201ENST00000422058 457 ntBASIC3.57□□□□□ -1.84
CDH12P55289 RPL21P109-201ENST00000422213 475 ntBASIC3.57□□□□□ -1.84
CDH12P55289 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH12P55289 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.57□□□□□ -1.84
CDH12P55289 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.57□□□□□ -1.84
CDH12P55289 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH12P55289 TIMM9P3-201ENST00000428659 274 ntBASIC3.57□□□□□ -1.84
CDH12P55289 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH12P55289 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.57□□□□□ -1.84
CDH12P55289 SNORD108-201ENST00000459332 71 ntBASIC3.57□□□□□ -1.84
CDH12P55289 RPS3AP50-201ENST00000487064 803 ntBASIC3.57□□□□□ -1.84
CDH12P55289 AC023194.1-201ENST00000493084 308 ntBASIC3.57□□□□□ -1.84
CDH12P55289 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.57□□□□□ -1.84
CDH12P55289 AC135721.1-201ENST00000497954 479 ntBASIC3.57□□□□□ -1.84
CDH12P55289 AC090572.1-201ENST00000519251 160 ntBASIC3.57□□□□□ -1.84
CDH12P55289 AC087369.1-201ENST00000520775 996 ntBASIC3.57□□□□□ -1.84
CDH12P55289 SUMO2P20-201ENST00000520803 283 ntBASIC3.57□□□□□ -1.84
CDH12P55289 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH12P55289 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.57□□□□□ -1.84
CDH12P55289 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH12P55289 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.57□□□□□ -1.84
CDH12P55289 YPEL5P3-201ENST00000547227 352 ntBASIC3.57□□□□□ -1.84
CDH12P55289 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH12P55289 HMGB1P33-201ENST00000563485 527 ntBASIC3.57□□□□□ -1.84
CDH12P55289 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH12P55289 AC103710.2-201ENST00000609912 942 ntBASIC3.57□□□□□ -1.84
CDH12P55289 TUG1_1.1-201ENST00000610654 145 ntBASIC3.57□□□□□ -1.84
CDH12P55289 AL356321.1-201ENST00000621360 228 ntBASIC3.57□□□□□ -1.84
CDH12P55289 AL161637.1-201ENST00000622380 412 ntBASIC3.57□□□□□ -1.84
CDH12P55289 AL136313.1-201ENST00000624804 202 ntBASIC3.57□□□□□ -1.84
CDH12P55289 MIR3688-2-201ENST00000636963 87 ntBASIC3.57□□□□□ -1.84
CDH12P55289 AL645937.1-201ENST00000641739 1652 ntBASIC3.57□□□□□ -1.84
CDH12P55289 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CDH12P55289 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH12P55289 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH12P55289 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CDH12P55289 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms