Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC105224.1-201ENST00000587055 421 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH6P55285 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH6P55285 AC080013.4-201ENST00000607624 649 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AC120053.1-201ENST00000607706 736 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AL359198.2-201ENST00000611836 194 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AC084824.5-201ENST00000612009 413 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AC018926.1-201ENST00000616335 435 ntBASIC2.76□□□□□ -1.97
CDH6P55285 AC099654.7-201ENST00000635788 2127 ntBASIC2.76□□□□□ -1.97
CDH6P55285 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH6P55285 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH6P55285 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH6P55285 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CDH6P55285 TPTE2P4-201ENST00000258589 1605 ntBASIC2.75□□□□□ -1.97
CDH6P55285 SNORD65.1-201ENST00000390889 71 ntBASIC2.75□□□□□ -1.97
CDH6P55285 SNRPEP2-201ENST00000397592 279 ntBASIC2.75□□□□□ -1.97
CDH6P55285 AL356057.3-201ENST00000402607 340 ntBASIC2.75□□□□□ -1.97
CDH6P55285 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.75□□□□□ -1.97
CDH6P55285 AL513175.2-201ENST00000422071 443 ntBASIC2.75□□□□□ -1.97
CDH6P55285 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.75□□□□□ -1.97
CDH6P55285 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.75□□□□□ -1.97
CDH6P55285 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH6P55285 ARF4P4-201ENST00000439608 520 ntBASIC2.75□□□□□ -1.97
CDH6P55285 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.75□□□□□ -1.97
CDH6P55285 AL353691.1-201ENST00000451332 387 ntBASIC2.75□□□□□ -1.97
CDH6P55285 OFD1P3Y-201ENST00000453312 783 ntBASIC2.75□□□□□ -1.97
CDH6P55285 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH6P55285 PNPLA4P1-201ENST00000458328 305 ntBASIC2.75□□□□□ -1.97
CDH6P55285 RPS15AP17-201ENST00000470598 390 ntBASIC2.75□□□□□ -1.97
CDH6P55285 RPL31P60-201ENST00000478450 367 ntBASIC2.75□□□□□ -1.97
CDH6P55285 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDH6P55285 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.75□□□□□ -1.97
CDH6P55285 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH6P55285 AC022483.1-201ENST00000514020 567 ntBASIC2.75□□□□□ -1.97
CDH6P55285 OR4R2P-201ENST00000530815 597 ntBASIC2.75□□□□□ -1.97
CDH6P55285 AC087894.1-201ENST00000538359 518 ntBASIC2.75□□□□□ -1.97
CDH6P55285 EIF4BP1-201ENST00000554881 351 ntBASIC2.75□□□□□ -1.97
CDH6P55285 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH6P55285 DUXAP11-201ENST00000603858 526 ntBASIC2.75□□□□□ -1.97
CDH6P55285 CRYM-AS1-204ENST00000637983 556 ntBASIC2.75□□□□□ -1.97
CDH6P55285 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.75□□□□□ -1.97
CDH6P55285 AC097714.1-201ENST00000511272 1647 ntBASIC2.75□□□□□ -1.97
CDH6P55285 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDH6P55285 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CDH6P55285 FRG1BP-201ENST00000278882 761 ntBASIC2.74□□□□□ -1.97
CDH6P55285 OR5J1P-201ENST00000313544 939 ntBASIC2.74□□□□□ -1.97
CDH6P55285 MIR592-201ENST00000384959 97 ntBASIC2.74□□□□□ -1.97
CDH6P55285 RNA5SP210-201ENST00000391034 120 ntBASIC2.74□□□□□ -1.97
CDH6P55285 AL360182.1-201ENST00000397433 468 ntBASIC2.74□□□□□ -1.97
CDH6P55285 AL603865.2-201ENST00000401679 213 ntBASIC2.74□□□□□ -1.97
CDH6P55285 AL079342.2-201ENST00000403367 482 ntBASIC2.74□□□□□ -1.97
CDH6P55285 RPS7P9-201ENST00000414704 586 ntBASIC2.74□□□□□ -1.97
CDH6P55285 AL513477.1-202ENST00000417061 214 ntBASIC2.74□□□□□ -1.97
CDH6P55285 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH6P55285 AC007742.1-201ENST00000425789 329 ntBASIC2.74□□□□□ -1.97
CDH6P55285 AL590233.1-201ENST00000430017 456 ntBASIC2.74□□□□□ -1.97
CDH6P55285 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH6P55285 AC092573.2-201ENST00000434546 243 ntBASIC2.74□□□□□ -1.97
CDH6P55285 ELOCP26-201ENST00000436067 329 ntBASIC2.74□□□□□ -1.97
CDH6P55285 AC092427.1-201ENST00000439177 601 ntBASIC2.74□□□□□ -1.97
CDH6P55285 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.74□□□□□ -1.97
CDH6P55285 RPS27AP9-201ENST00000477681 438 ntBASIC2.74□□□□□ -1.97
CDH6P55285 RPL30P5-201ENST00000494923 336 ntBASIC2.74□□□□□ -1.97
CDH6P55285 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH6P55285 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.74□□□□□ -1.97
CDH6P55285 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.74□□□□□ -1.97
CDH6P55285 CASP1P1-201ENST00000526345 212 ntBASIC2.74□□□□□ -1.97
CDH6P55285 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH6P55285 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.74□□□□□ -1.97
CDH6P55285 NBEAP1-201ENST00000554452 979 ntBASIC2.74□□□□□ -1.97
CDH6P55285 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH6P55285 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH6P55285 HMGB1P14-201ENST00000557424 591 ntBASIC2.74□□□□□ -1.97
CDH6P55285 HSPE1P3-201ENST00000559254 309 ntBASIC2.74□□□□□ -1.97
CDH6P55285 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.74□□□□□ -1.97
CDH6P55285 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CDH6P55285 MTCO3P13-201ENST00000577757 781 ntBASIC2.74□□□□□ -1.97
CDH6P55285 OR4K8P-201ENST00000578842 1048 ntBASIC2.74□□□□□ -1.97
CDH6P55285 MIR4637-201ENST00000582405 84 ntBASIC2.74□□□□□ -1.97
CDH6P55285 RPL23AP78-201ENST00000599928 470 ntBASIC2.74□□□□□ -1.97
CDH6P55285 U73023.1-201ENST00000603134 700 ntBASIC2.74□□□□□ -1.97
CDH6P55285 RPL21P136-201ENST00000605378 396 ntBASIC2.74□□□□□ -1.97
CDH6P55285 DUXAP10-204ENST00000612052 616 ntBASIC2.74□□□□□ -1.97
CDH6P55285 MIR7106-201ENST00000612419 65 ntBASIC2.74□□□□□ -1.97
CDH6P55285 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CDH6P55285 AC006386.2-201ENST00000624491 75 ntBASIC2.74□□□□□ -1.97
CDH6P55285 AC012005.1-201ENST00000624575 75 ntBASIC2.74□□□□□ -1.97
CDH6P55285 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.74□□□□□ -1.97
CDH6P55285 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.74□□□□□ -1.97
CDH6P55285 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH6P55285 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDH6P55285 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.73□□□□□ -1.97
CDH6P55285 FAM35BP-202ENST00000497389 3337 ntBASIC2.73□□□□□ -1.97
CDH6P55285 NACA3P-201ENST00000359690 648 ntBASIC2.73□□□□□ -1.97
CDH6P55285 SNORA63.3-201ENST00000362682 132 ntBASIC2.73□□□□□ -1.97
CDH6P55285 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDH6P55285 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CDH6P55285 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDH6P55285 HMGN2P35-201ENST00000412164 270 ntBASIC2.73□□□□□ -1.97
CDH6P55285 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms