Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
ATXN1P54253 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
ATXN1P54253 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ATXN1P54253 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ATXN1P54253 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ATXN1P54253 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ATXN1P54253 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATXN1P54253 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.43□□□□□ -1.7
ATXN1P54253 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.43□□□□□ -1.7
ATXN1P54253 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATXN1P54253 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.43□□□□□ -1.7
ATXN1P54253 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.43□□□□□ -1.7
ATXN1P54253 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
ATXN1P54253 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ATXN1P54253 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ATXN1P54253 RPL5P18-201ENST00000406671 891 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.43□□□□□ -1.7
ATXN1P54253 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.43□□□□□ -1.7
ATXN1P54253 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.43□□□□□ -1.7
ATXN1P54253 AC233728.2-201ENST00000425348 757 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 AL035410.1-201ENST00000427409 427 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.43□□□□□ -1.7
ATXN1P54253 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.43□□□□□ -1.7
ATXN1P54253 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.43□□□□□ -1.7
ATXN1P54253 RPL23AP74-201ENST00000437246 471 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 AP000873.1-201ENST00000463987 400 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 AC090453.1-201ENST00000495560 436 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.43□□□□□ -1.7
ATXN1P54253 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.43□□□□□ -1.7
ATXN1P54253 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.43□□□□□ -1.7
ATXN1P54253 AC018710.1-201ENST00000506509 158 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.43□□□□□ -1.7
ATXN1P54253 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.43□□□□□ -1.7
ATXN1P54253 AC034159.1-201ENST00000513885 583 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.43□□□□□ -1.7
ATXN1P54253 HSPA8P13-201ENST00000523715 472 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 COX6CP5-201ENST00000527162 228 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 OR5AP1P-201ENST00000529730 940 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 AP003385.6-201ENST00000531603 374 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.43□□□□□ -1.7
ATXN1P54253 AK6P1-201ENST00000540219 478 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.43□□□□□ -1.7
ATXN1P54253 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.43□□□□□ -1.7
ATXN1P54253 RPL21P12-201ENST00000559810 515 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.43□□□□□ -1.7
ATXN1P54253 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.43□□□□□ -1.7
ATXN1P54253 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.43□□□□□ -1.7
ATXN1P54253 BBIP1P1-201ENST00000602999 279 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 AL355812.1-201ENST00000603215 216 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 AC008536.2-201ENST00000607284 349 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 HMGB1P24-202ENST00000615653 685 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 AC012314.7-201ENST00000619693 93 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATXN1P54253 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ATXN1P54253 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATXN1P54253 NOL8P1-201ENST00000508336 3529 ntBASIC4.43□□□□□ -1.7
ATXN1P54253 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATXN1P54253 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ATXN1P54253 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ATXN1P54253 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
ATXN1P54253 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATXN1P54253 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.42□□□□□ -1.7
ATXN1P54253 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
ATXN1P54253 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATXN1P54253 MFSD8-242ENST00000641690 4199 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 XIAPP3-201ENST00000312918 795 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 Y_RNA.142-201ENST00000363491 102 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 Y_RNA.459-201ENST00000384251 102 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 RNU6-769P-201ENST00000384407 104 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 Y_RNA.493-201ENST00000384422 102 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 RNU6-1160P-201ENST00000384546 104 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 AL031679.1-201ENST00000400616 525 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 AL603766.1-201ENST00000407763 664 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.42□□□□□ -1.7
ATXN1P54253 RPS12P5-201ENST00000423449 371 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATXN1P54253 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.42□□□□□ -1.7
ATXN1P54253 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.42□□□□□ -1.7
ATXN1P54253 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.42□□□□□ -1.7
ATXN1P54253 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.42□□□□□ -1.7
ATXN1P54253 AC098824.1-201ENST00000453565 980 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 SNRPGP5-201ENST00000456003 220 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 BTF3P5-201ENST00000457252 467 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 RPL7P15-201ENST00000461190 712 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.42□□□□□ -1.7
ATXN1P54253 RPL31P50-201ENST00000471002 296 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
ATXN1P54253 RPL35P6-201ENST00000490024 372 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 AC105252.1-201ENST00000503089 286 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.42□□□□□ -1.7
ATXN1P54253 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.42□□□□□ -1.7
ATXN1P54253 MTCO3P44-201ENST00000510977 541 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 LRRC34P2-201ENST00000514850 553 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 RNU6-406P-201ENST00000516470 107 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 COX6CP8-201ENST00000522620 226 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 ELOCP31-201ENST00000540463 467 ntBASIC4.42□□□□□ -1.7
ATXN1P54253 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.42□□□□□ -1.7
ATXN1P54253 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms