Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC092447.6-201ENST00000414578 210 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 CDK8P2-201ENST00000415020 547 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 MTCO3P12-201ENST00000416718 547 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 MTCO2P34-201ENST00000421994 607 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.74□□□□□ -1.81
CLCN3P51790 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.74□□□□□ -1.81
CLCN3P51790 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.74□□□□□ -1.81
CLCN3P51790 FTH1P6-201ENST00000430768 320 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 RPS6P12-201ENST00000432491 726 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.74□□□□□ -1.81
CLCN3P51790 AC108734.1-201ENST00000439549 399 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 EPS15P1-201ENST00000448836 336 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.74□□□□□ -1.81
CLCN3P51790 AC115115.1-201ENST00000449927 248 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 MTND1P27-201ENST00000451117 902 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 SNORD121B-201ENST00000458838 81 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.74□□□□□ -1.81
CLCN3P51790 RN7SL807P-201ENST00000470923 297 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.74□□□□□ -1.81
CLCN3P51790 AC116337.2-201ENST00000477662 156 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.74□□□□□ -1.81
CLCN3P51790 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.74□□□□□ -1.81
CLCN3P51790 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLCN3P51790 AC091965.2-201ENST00000512324 613 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 AL117351.2-201ENST00000513571 157 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 RNU6-720P-201ENST00000516363 108 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 MTND1P5-201ENST00000517906 940 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 IGHV3-32-201ENST00000519182 355 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLCN3P51790 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLCN3P51790 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.74□□□□□ -1.81
CLCN3P51790 AL121576.1-201ENST00000556055 276 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 AC116096.1-201ENST00000566804 2314 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 AP001094.1-201ENST00000579805 193 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLCN3P51790 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
CLCN3P51790 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.74□□□□□ -1.81
CLCN3P51790 DEFB131E-202ENST00000602581 683 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 AL162713.1-201ENST00000604480 262 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 BCRP9-201ENST00000605312 388 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 AC012360.2-201ENST00000609349 391 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLCN3P51790 AL590240.3-201ENST00000621416 943 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 AL356266.1-201ENST00000623311 483 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.74□□□□□ -1.81
CLCN3P51790 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.74□□□□□ -1.81
CLCN3P51790 AC138649.5-201ENST00000637456 137 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.74□□□□□ -1.81
CLCN3P51790 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLCN3P51790 MTND4P16-201ENST00000466108 1367 ntBASIC3.74□□□□□ -1.81
CLCN3P51790 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CLCN3P51790 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLCN3P51790 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.73□□□□□ -1.81
CLCN3P51790 AC004925.1-201ENST00000624256 2706 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.73□□□□□ -1.81
CLCN3P51790 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLCN3P51790 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLCN3P51790 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLCN3P51790 XIAPP3-201ENST00000312918 795 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLCN3P51790 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 RNU2-16P-201ENST00000410712 136 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 Y_RNA.619-201ENST00000410951 90 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.73□□□□□ -1.81
CLCN3P51790 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCN3P51790 AC063979.1-201ENST00000415539 377 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 AC109583.1-201ENST00000432156 268 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCN3P51790 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCN3P51790 USP9YP29-201ENST00000445112 563 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 ST13P20-201ENST00000447996 1065 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 MTCYBP1-201ENST00000454315 1119 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 MTCO3P20-201ENST00000454926 688 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 OR6K1P-201ENST00000456766 971 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 RNU6-956P-201ENST00000458868 103 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 HMGB1P36-201ENST00000487709 576 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.73□□□□□ -1.81
CLCN3P51790 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCN3P51790 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLCN3P51790 AC005921.1-201ENST00000510589 286 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCN3P51790 MTCYBP41-201ENST00000528913 1123 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 AC013828.2-201ENST00000532487 235 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 CR383656.7-201ENST00000548164 174 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 SETP2-201ENST00000553886 926 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 AC091489.2-201ENST00000566263 604 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCN3P51790 EIF1P4-201ENST00000572664 335 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCN3P51790 AL606834.2-201ENST00000602954 668 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 U73023.1-201ENST00000603134 700 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLCN3P51790 AC002550.2-201ENST00000621246 394 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLCN3P51790 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.73□□□□□ -1.81
CLCN3P51790 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLCN3P51790 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.72□□□□□ -1.81
CLCN3P51790 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms