Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC078918.1-201ENST00000498515 228 ntBASIC1.59□□□□□ -2.15
HTTP42858 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.59□□□□□ -2.15
HTTP42858 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.59□□□□□ -2.15
HTTP42858 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.59□□□□□ -2.15
HTTP42858 AC110774.1-201ENST00000623567 2018 ntBASIC1.59□□□□□ -2.15
HTTP42858 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
HTTP42858 AC017078.1-201ENST00000416146 368 ntBASIC1.59□□□□□ -2.16
HTTP42858 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
HTTP42858 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.59□□□□□ -2.16
HTTP42858 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.59□□□□□ -2.16
HTTP42858 AC007375.1-201ENST00000554513 578 ntBASIC1.59□□□□□ -2.16
HTTP42858 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.59□□□□□ -2.16
HTTP42858 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
HTTP42858 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.16
HTTP42858 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
HTTP42858 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.59□□□□□ -2.16
HTTP42858 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
HTTP42858 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
HTTP42858 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.58□□□□□ -2.16
HTTP42858 snoU13.3-201ENST00000459441 104 ntBASIC1.58□□□□□ -2.16
HTTP42858 RPL7P5-201ENST00000471472 736 ntBASIC1.58□□□□□ -2.16
HTTP42858 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.58□□□□□ -2.16
HTTP42858 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.58□□□□□ -2.16
HTTP42858 MIR3618-201ENST00000580330 88 ntBASIC1.58□□□□□ -2.16
HTTP42858 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HTTP42858 RBBP8P1-201ENST00000449447 1844 ntBASIC1.58□□□□□ -2.16
HTTP42858 AC066616.2-201ENST00000559334 1481 ntBASIC1.58□□□□□ -2.16
HTTP42858 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.58□□□□□ -2.16
HTTP42858 FABP5P5-201ENST00000515537 406 ntBASIC1.58□□□□□ -2.16
HTTP42858 AC023825.1-201ENST00000566704 1030 ntBASIC1.58□□□□□ -2.16
HTTP42858 AC112191.3-201ENST00000604371 277 ntBASIC1.58□□□□□ -2.16
HTTP42858 AC012493.3-201ENST00000604494 112 ntBASIC1.58□□□□□ -2.16
HTTP42858 RNU6-328P-201ENST00000390887 106 ntBASIC1.57□□□□□ -2.16
HTTP42858 SNORA68.2-201ENST00000391263 128 ntBASIC1.57□□□□□ -2.16
HTTP42858 RPL17P12-201ENST00000413391 526 ntBASIC1.57□□□□□ -2.16
HTTP42858 RPPH1-2P-201ENST00000516688 293 ntBASIC1.57□□□□□ -2.16
HTTP42858 AL158801.5-201ENST00000623123 465 ntBASIC1.57□□□□□ -2.16
HTTP42858 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.57□□□□□ -2.16
HTTP42858 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
HTTP42858 SETP8-201ENST00000435341 628 ntBASIC1.57□□□□□ -2.16
HTTP42858 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.57□□□□□ -2.16
HTTP42858 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
HTTP42858 AC012640.5-201ENST00000623897 319 ntBASIC1.57□□□□□ -2.16
HTTP42858 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HTTP42858 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HTTP42858 AC240504.1-201ENST00000395709 845 ntBASIC1.57□□□□□ -2.16
HTTP42858 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.57□□□□□ -2.16
HTTP42858 AC021087.2-201ENST00000504656 1203 ntBASIC1.57□□□□□ -2.16
HTTP42858 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.57□□□□□ -2.16
HTTP42858 RPL23AP78-201ENST00000599928 470 ntBASIC1.57□□□□□ -2.16
HTTP42858 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.57□□□□□ -2.16
HTTP42858 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HTTP42858 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.56□□□□□ -2.16
HTTP42858 Y_RNA.294-201ENST00000364916 102 ntBASIC1.56□□□□□ -2.16
HTTP42858 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.56□□□□□ -2.16
HTTP42858 MTCO1P48-201ENST00000448024 1096 ntBASIC1.56□□□□□ -2.16
HTTP42858 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.56□□□□□ -2.16
HTTP42858 RNU6-405P-201ENST00000516637 110 ntBASIC1.56□□□□□ -2.16
HTTP42858 RNU6-826P-201ENST00000516827 104 ntBASIC1.56□□□□□ -2.16
HTTP42858 RNU6-467P-201ENST00000517027 110 ntBASIC1.56□□□□□ -2.16
HTTP42858 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.56□□□□□ -2.16
HTTP42858 AC084364.2-201ENST00000546924 395 ntBASIC1.56□□□□□ -2.16
HTTP42858 AL049838.1-201ENST00000563647 981 ntBASIC1.56□□□□□ -2.16
HTTP42858 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.56□□□□□ -2.16
HTTP42858 MIR4506-201ENST00000584693 77 ntBASIC1.56□□□□□ -2.16
HTTP42858 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.56□□□□□ -2.16
HTTP42858 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
HTTP42858 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HTTP42858 AC098934.3-201ENST00000430450 190 ntBASIC1.56□□□□□ -2.16
HTTP42858 RFC5P1-201ENST00000454419 874 ntBASIC1.56□□□□□ -2.16
HTTP42858 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.56□□□□□ -2.16
HTTP42858 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.56□□□□□ -2.16
HTTP42858 AC008126.1-201ENST00000549019 480 ntBASIC1.56□□□□□ -2.16
HTTP42858 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.56□□□□□ -2.16
HTTP42858 AC006254.3-201ENST00000603353 884 ntBASIC1.56□□□□□ -2.16
HTTP42858 uc_338.12-201ENST00000616344 181 ntBASIC1.56□□□□□ -2.16
HTTP42858 AC008127.2-201ENST00000549925 1075 ntBASIC1.55□□□□□ -2.16
HTTP42858 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HTTP42858 AC087468.1-201ENST00000604365 630 ntBASIC1.55□□□□□ -2.16
HTTP42858 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.55□□□□□ -2.16
HTTP42858 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.55□□□□□ -2.16
HTTP42858 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.55□□□□□ -2.16
HTTP42858 THAP5P1-201ENST00000439089 262 ntBASIC1.55□□□□□ -2.16
HTTP42858 AC079776.3-201ENST00000450665 370 ntBASIC1.55□□□□□ -2.16
HTTP42858 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.55□□□□□ -2.16
HTTP42858 ZNF271P-202ENST00000465539 1970 ntBASIC1.55□□□□□ -2.16
HTTP42858 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HTTP42858 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.55□□□□□ -2.16
HTTP42858 SNORA40.6-201ENST00000391153 128 ntBASIC1.55□□□□□ -2.16
HTTP42858 Z85995.1-201ENST00000415547 335 ntBASIC1.55□□□□□ -2.16
HTTP42858 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.55□□□□□ -2.16
HTTP42858 AL583843.1-201ENST00000456070 346 ntBASIC1.55□□□□□ -2.16
HTTP42858 RPS26P24-201ENST00000497656 331 ntBASIC1.55□□□□□ -2.16
HTTP42858 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.55□□□□□ -2.16
HTTP42858 SETP7-201ENST00000552169 453 ntBASIC1.55□□□□□ -2.16
HTTP42858 AL121917.1-203ENST00000605534 577 ntBASIC1.55□□□□□ -2.16
HTTP42858 MIR6078-201ENST00000611069 100 ntBASIC1.55□□□□□ -2.16
HTTP42858 AC009541.1-201ENST00000438279 2662 ntBASIC1.55□□□□□ -2.16
HTTP42858 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.55□□□□□ -2.16
HTTP42858 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms