Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.36□□□□□ -1.87
CTNNA1P35221 AC007458.1-201ENST00000542812 373 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.36□□□□□ -1.87
CTNNA1P35221 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.36□□□□□ -1.87
CTNNA1P35221 RPL21P12-201ENST00000559810 515 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.36□□□□□ -1.87
CTNNA1P35221 AC022662.1-201ENST00000580252 331 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 MIR2682-201ENST00000580305 110 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.36□□□□□ -1.87
CTNNA1P35221 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.36□□□□□ -1.87
CTNNA1P35221 AC006386.1-201ENST00000619436 415 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 AL138713.1-201ENST00000624026 2130 ntBASIC3.36□□□□□ -1.87
CTNNA1P35221 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.36□□□□□ -1.87
CTNNA1P35221 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.36□□□□□ -1.87
CTNNA1P35221 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.36□□□□□ -1.87
CTNNA1P35221 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CTNNA1P35221 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.35□□□□□ -1.87
CTNNA1P35221 MTND5P19-201ENST00000424872 1794 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 MIR554-201ENST00000384874 96 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 U3.20-201ENST00000390909 217 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CTNNA1P35221 BX323014.1-201ENST00000412876 237 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 RPS29P4-201ENST00000414733 161 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 SDCBPP3-201ENST00000419629 891 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.35□□□□□ -1.87
CTNNA1P35221 UBE2V1P13-201ENST00000436983 439 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 PTENP1-201ENST00000447117 1215 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 RPS20P20-201ENST00000460498 340 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 RNU6-56P-201ENST00000516986 93 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 SNORA31.26-201ENST00000517250 137 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 AC023632.4-201ENST00000517783 191 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.35□□□□□ -1.87
CTNNA1P35221 AC087373.1-201ENST00000524920 491 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.35□□□□□ -1.87
CTNNA1P35221 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.35□□□□□ -1.87
CTNNA1P35221 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.35□□□□□ -1.87
CTNNA1P35221 TRAV28-201ENST00000557548 323 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.35□□□□□ -1.87
CTNNA1P35221 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.35□□□□□ -1.87
CTNNA1P35221 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.35□□□□□ -1.87
CTNNA1P35221 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.35□□□□□ -1.87
CTNNA1P35221 AC008739.2-201ENST00000597006 317 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 AL162713.1-201ENST00000604480 262 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.35□□□□□ -1.87
CTNNA1P35221 AC103710.4-201ENST00000609301 899 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 uc_338.25-201ENST00000613756 156 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.35□□□□□ -1.87
CTNNA1P35221 AC002064.3-201ENST00000623448 346 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 AC079228.1-201ENST00000624774 1049 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 AC019226.1-201ENST00000625666 515 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.35□□□□□ -1.87
CTNNA1P35221 Z83843.1-201ENST00000604070 3685 ntBASIC3.35□□□□□ -1.87
CTNNA1P35221 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CTNNA1P35221 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CTNNA1P35221 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.34□□□□□ -1.87
CTNNA1P35221 AP000776.1-201ENST00000530032 1663 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 RNU1-39P-201ENST00000383897 165 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 SNORD21-201ENST00000383953 95 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 RN7SKP220-201ENST00000410611 288 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 MTND1P21-201ENST00000412991 285 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 NDUFB4P5-201ENST00000415445 361 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 AC083875.1-201ENST00000419509 405 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 AC099548.1-201ENST00000421443 426 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.34□□□□□ -1.87
CTNNA1P35221 AC104332.2-201ENST00000429959 156 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 RPS12P18-201ENST00000442381 270 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 AL162389.1-201ENST00000449233 177 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CTNNA1P35221 ELOCP23-201ENST00000452014 332 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 ATG12P2-201ENST00000456830 416 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.34□□□□□ -1.87
CTNNA1P35221 RPL7P18-201ENST00000478965 734 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 AC233702.1-201ENST00000482905 502 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.34□□□□□ -1.87
CTNNA1P35221 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.34□□□□□ -1.87
CTNNA1P35221 AC009901.1-201ENST00000506703 541 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 AC093281.2-201ENST00000510153 597 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.34□□□□□ -1.87
CTNNA1P35221 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.34□□□□□ -1.87
CTNNA1P35221 RNA5SP291-201ENST00000517222 105 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.34□□□□□ -1.87
CTNNA1P35221 CCNG2P1-201ENST00000549521 1000 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.34□□□□□ -1.87
CTNNA1P35221 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.34□□□□□ -1.87
CTNNA1P35221 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.34□□□□□ -1.87
CTNNA1P35221 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.34□□□□□ -1.87
CTNNA1P35221 AL596327.1-201ENST00000603629 213 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 AC080013.3-201ENST00000606839 578 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.34□□□□□ -1.87
CTNNA1P35221 AC009464.1-201ENST00000615731 469 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 AL356863.1-201ENST00000623378 1080 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 AC099063.3-201ENST00000642066 185 ntBASIC3.34□□□□□ -1.87
CTNNA1P35221 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.34□□□□□ -1.87
CTNNA1P35221 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CTNNA1P35221 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CTNNA1P35221 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms