Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNY4P28-201ENST00000365281 93 ntBASIC5.73□□□□□ -1.49
VARSP26640 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VARSP26640 RNU6-22P-201ENST00000384355 107 ntBASIC5.73□□□□□ -1.49
VARSP26640 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VARSP26640 RNU6-607P-201ENST00000411283 108 ntBASIC5.73□□□□□ -1.49
VARSP26640 RPL31P2-201ENST00000413849 377 ntBASIC5.73□□□□□ -1.49
VARSP26640 CYCSP33-201ENST00000414485 327 ntBASIC5.73□□□□□ -1.49
VARSP26640 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.73□□□□□ -1.49
VARSP26640 AL035660.1-201ENST00000422041 222 ntBASIC5.73□□□□□ -1.49
VARSP26640 AC099677.3-201ENST00000427081 395 ntBASIC5.73□□□□□ -1.49
VARSP26640 AC004938.1-201ENST00000438468 308 ntBASIC5.73□□□□□ -1.49
VARSP26640 RPS12P17-201ENST00000438591 377 ntBASIC5.73□□□□□ -1.49
VARSP26640 AL445665.1-202ENST00000452436 324 ntBASIC5.73□□□□□ -1.49
VARSP26640 HLA-DPA3-207ENST00000454398 229 ntBASIC5.73□□□□□ -1.49
VARSP26640 RNU6-1037P-201ENST00000459571 107 ntBASIC5.73□□□□□ -1.49
VARSP26640 AC006539.1-201ENST00000481419 501 ntBASIC5.73□□□□□ -1.49
VARSP26640 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.73□□□□□ -1.49
VARSP26640 RPL23AP87-202ENST00000573039 466 ntBASIC5.73□□□□□ -1.49
VARSP26640 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.73□□□□□ -1.49
VARSP26640 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.73□□□□□ -1.49
VARSP26640 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.73□□□□□ -1.49
VARSP26640 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.73□□□□□ -1.49
VARSP26640 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.73□□□□□ -1.49
VARSP26640 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VARSP26640 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.73□□□□□ -1.49
VARSP26640 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VARSP26640 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VARSP26640 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.73□□□□□ -1.49
VARSP26640 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VARSP26640 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
VARSP26640 AC092747.4-201ENST00000620519 1861 ntBASIC5.73□□□□□ -1.49
VARSP26640 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VARSP26640 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.72□□□□□ -1.49
VARSP26640 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VARSP26640 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VARSP26640 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VARSP26640 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VARSP26640 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VARSP26640 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VARSP26640 SELENOWP1-201ENST00000322792 252 ntBASIC5.72□□□□□ -1.49
VARSP26640 Y_RNA.358-201ENST00000365491 99 ntBASIC5.72□□□□□ -1.49
VARSP26640 RNU6-817P-201ENST00000391083 104 ntBASIC5.72□□□□□ -1.49
VARSP26640 U3.35-201ENST00000408405 208 ntBASIC5.72□□□□□ -1.49
VARSP26640 RPS15AP40-201ENST00000419621 391 ntBASIC5.72□□□□□ -1.49
VARSP26640 GAPDHP48-201ENST00000436626 961 ntBASIC5.72□□□□□ -1.49
VARSP26640 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.72□□□□□ -1.49
VARSP26640 EEF1A1P1-201ENST00000447052 739 ntBASIC5.72□□□□□ -1.49
VARSP26640 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.72□□□□□ -1.49
VARSP26640 RPL30P10-201ENST00000488148 337 ntBASIC5.72□□□□□ -1.49
VARSP26640 AC009120.1-201ENST00000493458 473 ntBASIC5.72□□□□□ -1.49
VARSP26640 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.72□□□□□ -1.49
VARSP26640 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.72□□□□□ -1.49
VARSP26640 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.72□□□□□ -1.49
VARSP26640 RNU6-62P-201ENST00000516526 102 ntBASIC5.72□□□□□ -1.49
VARSP26640 RNA5SP340-201ENST00000517132 107 ntBASIC5.72□□□□□ -1.49
VARSP26640 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.72□□□□□ -1.49
VARSP26640 SNRPGP16-201ENST00000533275 226 ntBASIC5.72□□□□□ -1.49
VARSP26640 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.72□□□□□ -1.49
VARSP26640 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.72□□□□□ -1.49
VARSP26640 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.72□□□□□ -1.49
VARSP26640 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.72□□□□□ -1.49
VARSP26640 AC022884.2-201ENST00000578535 580 ntBASIC5.72□□□□□ -1.49
VARSP26640 AC060780.2-201ENST00000589047 198 ntBASIC5.72□□□□□ -1.49
VARSP26640 AC098826.3-201ENST00000603823 466 ntBASIC5.72□□□□□ -1.49
VARSP26640 AC123912.5-201ENST00000605470 343 ntBASIC5.72□□□□□ -1.49
VARSP26640 AL590240.4-201ENST00000616908 390 ntBASIC5.72□□□□□ -1.49
VARSP26640 U6.106-201ENST00000636360 105 ntBASIC5.72□□□□□ -1.49
VARSP26640 AL049767.1-202ENST00000637826 242 ntBASIC5.72□□□□□ -1.49
VARSP26640 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.72□□□□□ -1.49
VARSP26640 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VARSP26640 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
VARSP26640 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
VARSP26640 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.72□□□□□ -1.49
VARSP26640 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
VARSP26640 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.72□□□□□ -1.49
VARSP26640 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
VARSP26640 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
VARSP26640 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VARSP26640 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VARSP26640 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.71□□□□□ -1.5
VARSP26640 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.71□□□□□ -1.5
VARSP26640 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VARSP26640 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VARSP26640 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VARSP26640 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VARSP26640 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VARSP26640 Y_RNA.44-201ENST00000362676 108 ntBASIC5.71□□□□□ -1.5
VARSP26640 Y_RNA.383-201ENST00000383855 97 ntBASIC5.71□□□□□ -1.5
VARSP26640 Y_RNA.398-201ENST00000383952 99 ntBASIC5.71□□□□□ -1.5
VARSP26640 RNU6-102P-201ENST00000384485 104 ntBASIC5.71□□□□□ -1.5
VARSP26640 RNU6-146P-201ENST00000384602 108 ntBASIC5.71□□□□□ -1.5
VARSP26640 RPL21P75-201ENST00000396599 483 ntBASIC5.71□□□□□ -1.5
VARSP26640 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.71□□□□□ -1.5
VARSP26640 RPL21P28-201ENST00000401418 483 ntBASIC5.71□□□□□ -1.5
VARSP26640 AL033519.2-201ENST00000403958 392 ntBASIC5.71□□□□□ -1.5
VARSP26640 RN7SKP286-201ENST00000410894 299 ntBASIC5.71□□□□□ -1.5
VARSP26640 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.71□□□□□ -1.5
VARSP26640 AL590556.1-201ENST00000423231 483 ntBASIC5.71□□□□□ -1.5
VARSP26640 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VARSP26640 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms