Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RFX1P22670 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.74□□□□□ -1.49
RFX1P22670 E2F6P2-201ENST00000420708 748 ntBASIC5.74□□□□□ -1.49
RFX1P22670 AL590632.1-201ENST00000424289 371 ntBASIC5.74□□□□□ -1.49
RFX1P22670 AC108075.1-201ENST00000424692 529 ntBASIC5.74□□□□□ -1.49
RFX1P22670 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.74□□□□□ -1.49
RFX1P22670 AC073063.1-201ENST00000434352 607 ntBASIC5.74□□□□□ -1.49
RFX1P22670 AC093414.1-201ENST00000434712 514 ntBASIC5.74□□□□□ -1.49
RFX1P22670 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.74□□□□□ -1.49
RFX1P22670 IPO7P1-201ENST00000442031 636 ntBASIC5.74□□□□□ -1.49
RFX1P22670 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.74□□□□□ -1.49
RFX1P22670 AL135752.1-201ENST00000479477 471 ntBASIC5.74□□□□□ -1.49
RFX1P22670 AC026782.1-201ENST00000512952 449 ntBASIC5.74□□□□□ -1.49
RFX1P22670 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.74□□□□□ -1.49
RFX1P22670 Y_RNA.708-201ENST00000516950 96 ntBASIC5.74□□□□□ -1.49
RFX1P22670 RNU1-54P-201ENST00000517181 120 ntBASIC5.74□□□□□ -1.49
RFX1P22670 AC009902.1-201ENST00000519351 183 ntBASIC5.74□□□□□ -1.49
RFX1P22670 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.74□□□□□ -1.49
RFX1P22670 HMGB1P40-201ENST00000525121 540 ntBASIC5.74□□□□□ -1.49
RFX1P22670 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.74□□□□□ -1.49
RFX1P22670 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.74□□□□□ -1.49
RFX1P22670 AC026371.1-201ENST00000551867 419 ntBASIC5.74□□□□□ -1.49
RFX1P22670 MIR4480-201ENST00000582492 71 ntBASIC5.74□□□□□ -1.49
RFX1P22670 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.74□□□□□ -1.49
RFX1P22670 AC006116.3-201ENST00000592968 361 ntBASIC5.74□□□□□ -1.49
RFX1P22670 AC018462.2-201ENST00000605375 395 ntBASIC5.74□□□□□ -1.49
RFX1P22670 AC083806.3-201ENST00000614016 455 ntBASIC5.74□□□□□ -1.49
RFX1P22670 AC010205.1-201ENST00000616668 449 ntBASIC5.74□□□□□ -1.49
RFX1P22670 PISRT1.1-201ENST00000616930 107 ntBASIC5.74□□□□□ -1.49
RFX1P22670 7SK.10-201ENST00000621414 298 ntBASIC5.74□□□□□ -1.49
RFX1P22670 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.74□□□□□ -1.49
RFX1P22670 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.74□□□□□ -1.49
RFX1P22670 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFX1P22670 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFX1P22670 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFX1P22670 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.74□□□□□ -1.49
RFX1P22670 AL031595.2-201ENST00000624215 19071 ntBASIC5.74□□□□□ -1.49
RFX1P22670 MAPK10-263ENST00000641052 4307 ntBASIC5.74□□□□□ -1.49
RFX1P22670 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFX1P22670 AC004925.1-201ENST00000624256 2706 ntBASIC5.74□□□□□ -1.49
RFX1P22670 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFX1P22670 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RFX1P22670 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFX1P22670 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFX1P22670 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RFX1P22670 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.73□□□□□ -1.49
RFX1P22670 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFX1P22670 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.73□□□□□ -1.49
RFX1P22670 AC074029.4-201ENST00000624796 1859 ntBASIC5.73□□□□□ -1.49
RFX1P22670 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFX1P22670 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFX1P22670 RNA5SP335-201ENST00000363817 110 ntBASIC5.73□□□□□ -1.49
RFX1P22670 SNORA16A-201ENST00000384342 137 ntBASIC5.73□□□□□ -1.49
RFX1P22670 RNU1-106P-201ENST00000384382 164 ntBASIC5.73□□□□□ -1.49
RFX1P22670 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RFX1P22670 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.73□□□□□ -1.49
RFX1P22670 AL645568.3-201ENST00000433683 316 ntBASIC5.73□□□□□ -1.49
RFX1P22670 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.73□□□□□ -1.49
RFX1P22670 HIGD1AP11-201ENST00000438361 280 ntBASIC5.73□□□□□ -1.49
RFX1P22670 RPL21P23-201ENST00000446654 460 ntBASIC5.73□□□□□ -1.49
RFX1P22670 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.73□□□□□ -1.49
RFX1P22670 RPS29P22-201ENST00000472363 168 ntBASIC5.73□□□□□ -1.49
RFX1P22670 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.73□□□□□ -1.49
RFX1P22670 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.73□□□□□ -1.49
RFX1P22670 OR51K1P-201ENST00000510214 950 ntBASIC5.73□□□□□ -1.49
RFX1P22670 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.73□□□□□ -1.49
RFX1P22670 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.73□□□□□ -1.49
RFX1P22670 AC126177.5-201ENST00000549599 178 ntBASIC5.73□□□□□ -1.49
RFX1P22670 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.73□□□□□ -1.49
RFX1P22670 HMGB2P1-201ENST00000591146 634 ntBASIC5.73□□□□□ -1.49
RFX1P22670 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.73□□□□□ -1.49
RFX1P22670 AL354984.3-201ENST00000604803 325 ntBASIC5.73□□□□□ -1.49
RFX1P22670 AL132822.1-201ENST00000617063 513 ntBASIC5.73□□□□□ -1.49
RFX1P22670 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.73□□□□□ -1.49
RFX1P22670 PLCE1P1-201ENST00000622094 305 ntBASIC5.73□□□□□ -1.49
RFX1P22670 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.73□□□□□ -1.49
RFX1P22670 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RFX1P22670 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFX1P22670 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
RFX1P22670 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RFX1P22670 AP001273.1-201ENST00000624493 3152 ntBASIC5.73□□□□□ -1.49
RFX1P22670 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFX1P22670 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFX1P22670 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RFX1P22670 EOGT-210ENST00000615922 1931 ntBASIC5.72□□□□□ -1.49
RFX1P22670 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.72□□□□□ -1.49
RFX1P22670 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFX1P22670 MTND5P1-201ENST00000445440 1375 ntBASIC5.72□□□□□ -1.49
RFX1P22670 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFX1P22670 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFX1P22670 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.72□□□□□ -1.49
RFX1P22670 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFX1P22670 RNU6-173P-201ENST00000364215 104 ntBASIC5.72□□□□□ -1.49
RFX1P22670 RNU6-890P-201ENST00000384121 107 ntBASIC5.72□□□□□ -1.49
RFX1P22670 RNU6-95P-201ENST00000384697 107 ntBASIC5.72□□□□□ -1.49
RFX1P22670 MIR589-201ENST00000385238 99 ntBASIC5.72□□□□□ -1.49
RFX1P22670 HSPA8P15-201ENST00000401676 786 ntBASIC5.72□□□□□ -1.49
RFX1P22670 HSPE1P8-201ENST00000406997 288 ntBASIC5.72□□□□□ -1.49
RFX1P22670 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFX1P22670 RNU6-1050P-201ENST00000410388 107 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms