Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.56□□□□□ -1.68
ATF4P18848 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.56□□□□□ -1.68
ATF4P18848 AL356535.1-201ENST00000440335 398 ntBASIC4.56□□□□□ -1.68
ATF4P18848 AC002553.3-201ENST00000453002 341 ntBASIC4.56□□□□□ -1.68
ATF4P18848 PPIAP7-201ENST00000454070 489 ntBASIC4.56□□□□□ -1.68
ATF4P18848 DHFRP3-201ENST00000455595 559 ntBASIC4.56□□□□□ -1.68
ATF4P18848 AC084198.1-201ENST00000477747 402 ntBASIC4.56□□□□□ -1.68
ATF4P18848 RPL7AP6-201ENST00000477943 801 ntBASIC4.56□□□□□ -1.68
ATF4P18848 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.56□□□□□ -1.68
ATF4P18848 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATF4P18848 CDH12P4-201ENST00000517835 295 ntBASIC4.56□□□□□ -1.68
ATF4P18848 CDH12P3-201ENST00000517935 295 ntBASIC4.56□□□□□ -1.68
ATF4P18848 CDH12P1-201ENST00000518435 295 ntBASIC4.56□□□□□ -1.68
ATF4P18848 AC130365.2-201ENST00000525882 1201 ntBASIC4.56□□□□□ -1.68
ATF4P18848 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.56□□□□□ -1.68
ATF4P18848 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.56□□□□□ -1.68
ATF4P18848 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.56□□□□□ -1.68
ATF4P18848 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.56□□□□□ -1.68
ATF4P18848 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.56□□□□□ -1.68
ATF4P18848 AL138895.2-201ENST00000603019 178 ntBASIC4.56□□□□□ -1.68
ATF4P18848 AC004805.2-201ENST00000605382 482 ntBASIC4.56□□□□□ -1.68
ATF4P18848 AC092266.1-201ENST00000610958 165 ntBASIC4.56□□□□□ -1.68
ATF4P18848 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.56□□□□□ -1.68
ATF4P18848 AC133104.2-201ENST00000615272 193 ntBASIC4.56□□□□□ -1.68
ATF4P18848 AC090971.5-201ENST00000621102 293 ntBASIC4.56□□□□□ -1.68
ATF4P18848 AC099506.2-201ENST00000623074 221 ntBASIC4.56□□□□□ -1.68
ATF4P18848 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.56□□□□□ -1.68
ATF4P18848 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.56□□□□□ -1.68
ATF4P18848 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.56□□□□□ -1.68
ATF4P18848 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.56□□□□□ -1.68
ATF4P18848 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ATF4P18848 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
ATF4P18848 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF4P18848 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF4P18848 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATF4P18848 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
ATF4P18848 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF4P18848 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.55□□□□□ -1.68
ATF4P18848 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
ATF4P18848 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF4P18848 RNA5SP211-201ENST00000365516 117 ntBASIC4.55□□□□□ -1.68
ATF4P18848 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.55□□□□□ -1.68
ATF4P18848 RNY4P36-201ENST00000391116 96 ntBASIC4.55□□□□□ -1.68
ATF4P18848 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
ATF4P18848 RNU2-3P-201ENST00000410144 191 ntBASIC4.55□□□□□ -1.68
ATF4P18848 CYCSP33-201ENST00000414485 327 ntBASIC4.55□□□□□ -1.68
ATF4P18848 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.55□□□□□ -1.68
ATF4P18848 RNF10P1-201ENST00000418589 369 ntBASIC4.55□□□□□ -1.68
ATF4P18848 AC092047.1-201ENST00000424997 240 ntBASIC4.55□□□□□ -1.68
ATF4P18848 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.55□□□□□ -1.68
ATF4P18848 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.55□□□□□ -1.68
ATF4P18848 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.55□□□□□ -1.68
ATF4P18848 NDUFB1P2-201ENST00000449477 176 ntBASIC4.55□□□□□ -1.68
ATF4P18848 PPIAP27-201ENST00000453800 265 ntBASIC4.55□□□□□ -1.68
ATF4P18848 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.55□□□□□ -1.68
ATF4P18848 RPL12P30-201ENST00000488389 499 ntBASIC4.55□□□□□ -1.68
ATF4P18848 PGAM1P13-201ENST00000507497 754 ntBASIC4.55□□□□□ -1.68
ATF4P18848 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.55□□□□□ -1.68
ATF4P18848 AC025755.1-201ENST00000521306 278 ntBASIC4.55□□□□□ -1.68
ATF4P18848 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.55□□□□□ -1.68
ATF4P18848 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.55□□□□□ -1.68
ATF4P18848 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATF4P18848 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATF4P18848 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.55□□□□□ -1.68
ATF4P18848 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.55□□□□□ -1.68
ATF4P18848 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.55□□□□□ -1.68
ATF4P18848 AL645944.1-201ENST00000603857 493 ntBASIC4.55□□□□□ -1.68
ATF4P18848 AC136601.2-201ENST00000604356 474 ntBASIC4.55□□□□□ -1.68
ATF4P18848 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATF4P18848 MIR6128-201ENST00000615528 109 ntBASIC4.55□□□□□ -1.68
ATF4P18848 AC096861.1-201ENST00000616652 240 ntBASIC4.55□□□□□ -1.68
ATF4P18848 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATF4P18848 AC073869.10-201ENST00000642016 354 ntBASIC4.55□□□□□ -1.68
ATF4P18848 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.55□□□□□ -1.68
ATF4P18848 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.55□□□□□ -1.68
ATF4P18848 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
ATF4P18848 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF4P18848 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.55□□□□□ -1.68
ATF4P18848 AC022336.2-201ENST00000568966 2538 ntBASIC4.54□□□□□ -1.68
ATF4P18848 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATF4P18848 NCAPGP1-201ENST00000505112 1814 ntBASIC4.54□□□□□ -1.68
ATF4P18848 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATF4P18848 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.54□□□□□ -1.68
ATF4P18848 AC138393.1-203ENST00000327086 343 ntBASIC4.54□□□□□ -1.68
ATF4P18848 RNU1-134P-201ENST00000362935 165 ntBASIC4.54□□□□□ -1.68
ATF4P18848 RNA5SP28-201ENST00000363841 119 ntBASIC4.54□□□□□ -1.68
ATF4P18848 RN7SKP269-201ENST00000365545 319 ntBASIC4.54□□□□□ -1.68
ATF4P18848 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.54□□□□□ -1.68
ATF4P18848 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
ATF4P18848 RNU6-140P-201ENST00000384566 108 ntBASIC4.54□□□□□ -1.68
ATF4P18848 RNU6-1106P-201ENST00000390845 107 ntBASIC4.54□□□□□ -1.68
ATF4P18848 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.54□□□□□ -1.68
ATF4P18848 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.54□□□□□ -1.68
ATF4P18848 AL354751.2-201ENST00000415471 210 ntBASIC4.54□□□□□ -1.68
ATF4P18848 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.54□□□□□ -1.68
ATF4P18848 BX284632.2-201ENST00000421091 399 ntBASIC4.54□□□□□ -1.68
ATF4P18848 EIF4EP1-201ENST00000422311 642 ntBASIC4.54□□□□□ -1.68
ATF4P18848 SKA2P1-201ENST00000425592 390 ntBASIC4.54□□□□□ -1.68
ATF4P18848 SNRPEP9-201ENST00000436794 238 ntBASIC4.54□□□□□ -1.68
ATF4P18848 AC096775.1-201ENST00000437724 448 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms