Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 RNU6-528P-201ENST00000516926 100 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 RNU6-1073P-201ENST00000517182 106 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.72□□□□□ -1.81
CTPS1P17812 TRMT10BP1-201ENST00000519377 943 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.72□□□□□ -1.81
CTPS1P17812 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.72□□□□□ -1.81
CTPS1P17812 AC123904.2-201ENST00000548059 300 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.72□□□□□ -1.81
CTPS1P17812 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.72□□□□□ -1.81
CTPS1P17812 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.72□□□□□ -1.81
CTPS1P17812 AC006960.3-201ENST00000561845 705 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 AL356432.3-201ENST00000568952 465 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.72□□□□□ -1.81
CTPS1P17812 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.72□□□□□ -1.81
CTPS1P17812 AC007687.1-201ENST00000602704 304 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 AC121334.2-201ENST00000605387 271 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 RNU1-30P-201ENST00000606575 163 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 AC004492.1-201ENST00000607036 742 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 RNU6-87P-201ENST00000607561 108 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.72□□□□□ -1.81
CTPS1P17812 AL355472.4-201ENST00000610233 626 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 U7.8-201ENST00000619968 63 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 AC012150.2-201ENST00000621300 544 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 AC068792.1-201ENST00000621354 417 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 AC039056.2-201ENST00000622261 511 ntBASIC3.72□□□□□ -1.81
CTPS1P17812 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.72□□□□□ -1.81
CTPS1P17812 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.72□□□□□ -1.81
CTPS1P17812 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CTPS1P17812 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTPS1P17812 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTPS1P17812 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
CTPS1P17812 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.71□□□□□ -1.81
CTPS1P17812 FARSBP1-201ENST00000435808 1778 ntBASIC3.71□□□□□ -1.81
CTPS1P17812 ZNF285B-201ENST00000561698 1767 ntBASIC3.71□□□□□ -1.81
CTPS1P17812 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.71□□□□□ -1.81
CTPS1P17812 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.71□□□□□ -1.81
CTPS1P17812 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTPS1P17812 AL353746.1-201ENST00000566293 6881 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.71□□□□□ -1.82
CTPS1P17812 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTPS1P17812 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTPS1P17812 AL365440.1-201ENST00000436135 2167 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTPS1P17812 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.71□□□□□ -1.82
CTPS1P17812 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.71□□□□□ -1.82
CTPS1P17812 GNG5P1-201ENST00000255500 204 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 SNORA51.2-201ENST00000364595 132 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 RNU5A-6P-201ENST00000384136 116 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 RNU6-1181P-201ENST00000384191 106 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 RNU6-1215P-201ENST00000384441 102 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 Y_RNA.582-201ENST00000391023 95 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 RPS3AP36-201ENST00000398190 775 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 CCNG1P1-201ENST00000406783 885 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 RNU6-648P-201ENST00000410190 107 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.71□□□□□ -1.82
CTPS1P17812 RAB9AP3-201ENST00000412737 573 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 AF274854.1-201ENST00000413236 615 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 HMGB3P20-201ENST00000417997 600 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 AL035423.1-201ENST00000420331 213 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 AC104651.1-201ENST00000427559 735 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 GOT2P5-201ENST00000433995 546 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 NDUFB1P1-201ENST00000435191 180 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 RABEPKP1-201ENST00000440529 1026 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 RAB9AP1-201ENST00000449393 573 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 GAPDHP17-201ENST00000449858 1001 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 MTND1P9-201ENST00000453775 944 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.71□□□□□ -1.82
CTPS1P17812 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.71□□□□□ -1.82
CTPS1P17812 SNORA84-201ENST00000459229 133 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTPS1P17812 NIPA2P2-201ENST00000496376 1083 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 HMGN1P11-201ENST00000508668 303 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.71□□□□□ -1.82
CTPS1P17812 Y_RNA.672-201ENST00000516289 104 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 RNU6-430P-201ENST00000517078 107 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 AP003181.2-201ENST00000528941 181 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.71□□□□□ -1.82
CTPS1P17812 AC068790.3-201ENST00000602988 553 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.71□□□□□ -1.82
CTPS1P17812 AL590282.1-201ENST00000610379 1136 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 PISRT1-201ENST00000626175 531 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 AC110994.2-201ENST00000635481 492 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTPS1P17812 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTPS1P17812 AC004925.1-201ENST00000624256 2706 ntBASIC3.71□□□□□ -1.82
CTPS1P17812 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTPS1P17812 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CTPS1P17812 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.7□□□□□ -1.82
CTPS1P17812 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CTPS1P17812 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CTPS1P17812 Y_RNA.41-201ENST00000362646 102 ntBASIC3.7□□□□□ -1.82
CTPS1P17812 RNU1-18P-201ENST00000363062 164 ntBASIC3.7□□□□□ -1.82
CTPS1P17812 U8.3-201ENST00000363321 132 ntBASIC3.7□□□□□ -1.82
CTPS1P17812 RNA5SP51-201ENST00000364750 119 ntBASIC3.7□□□□□ -1.82
CTPS1P17812 RNU6-259P-201ENST00000383999 107 ntBASIC3.7□□□□□ -1.82
CTPS1P17812 MTCO3P12-201ENST00000416718 547 ntBASIC3.7□□□□□ -1.82
CTPS1P17812 AL137014.1-201ENST00000420490 1226 ntBASIC3.7□□□□□ -1.82
CTPS1P17812 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.7□□□□□ -1.82
CTPS1P17812 AC018644.1-201ENST00000429934 551 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms