Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.59□□□□□ -1.67
COL6A2P12110 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.59□□□□□ -1.67
COL6A2P12110 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.59□□□□□ -1.67
COL6A2P12110 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.59□□□□□ -1.67
COL6A2P12110 AL118558.2-201ENST00000556294 238 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 AC026951.1-201ENST00000559530 2459 ntBASIC4.59□□□□□ -1.67
COL6A2P12110 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.59□□□□□ -1.67
COL6A2P12110 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.59□□□□□ -1.67
COL6A2P12110 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.59□□□□□ -1.67
COL6A2P12110 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL6A2P12110 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.59□□□□□ -1.67
COL6A2P12110 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.59□□□□□ -1.67
COL6A2P12110 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
COL6A2P12110 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL6A2P12110 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL6A2P12110 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL6A2P12110 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.58□□□□□ -1.68
COL6A2P12110 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
COL6A2P12110 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL6A2P12110 SAMMSON-226ENST00000642089 1582 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL6A2P12110 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL6A2P12110 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.58□□□□□ -1.68
COL6A2P12110 RNU6-188P-201ENST00000364207 107 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 Y_RNA.414-201ENST00000384011 101 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 Y_RNA.576-201ENST00000384781 102 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AL592114.1-201ENST00000403842 483 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 RPL21P24-201ENST00000413752 448 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.58□□□□□ -1.68
COL6A2P12110 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.58□□□□□ -1.68
COL6A2P12110 AC016712.1-201ENST00000431088 378 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.58□□□□□ -1.68
COL6A2P12110 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.58□□□□□ -1.68
COL6A2P12110 AL590399.6-201ENST00000446396 307 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 RPL29P29-201ENST00000448725 423 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AC234775.1-201ENST00000454247 670 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 ISCUP1-201ENST00000454451 448 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.58□□□□□ -1.68
COL6A2P12110 RNU7-66P-201ENST00000459469 62 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.58□□□□□ -1.68
COL6A2P12110 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.58□□□□□ -1.68
COL6A2P12110 RN7SL432P-201ENST00000484057 298 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AC096576.1-201ENST00000489014 359 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 Y_RNA.654-201ENST00000497848 106 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.58□□□□□ -1.68
COL6A2P12110 AC098591.2-201ENST00000510152 315 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL6A2P12110 RN7SKP13-201ENST00000515933 244 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.58□□□□□ -1.68
COL6A2P12110 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.58□□□□□ -1.68
COL6A2P12110 AC109635.4-202ENST00000531666 412 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AC008033.2-201ENST00000542626 177 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.58□□□□□ -1.68
COL6A2P12110 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.58□□□□□ -1.68
COL6A2P12110 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.58□□□□□ -1.68
COL6A2P12110 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.58□□□□□ -1.68
COL6A2P12110 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.58□□□□□ -1.68
COL6A2P12110 AC011487.3-201ENST00000593607 453 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AL670379.6-201ENST00000603753 252 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AL670379.11-201ENST00000604059 253 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AC008162.1-201ENST00000604718 254 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AL670379.1-201ENST00000604752 252 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AL670379.5-201ENST00000605253 252 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AL670379.12-201ENST00000605291 253 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AL670379.8-201ENST00000605353 252 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AL670379.7-201ENST00000605823 252 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AC007390.2-201ENST00000606229 3803 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AC092807.2-201ENST00000609367 243 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AL365204.3-201ENST00000612448 685 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AL390240.1-201ENST00000612950 384 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 TUG1_2.1-201ENST00000614234 87 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.58□□□□□ -1.68
COL6A2P12110 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL6A2P12110 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL6A2P12110 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL6A2P12110 DDX10P1-201ENST00000448545 1933 ntBASIC4.58□□□□□ -1.68
COL6A2P12110 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL6A2P12110 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL6A2P12110 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
COL6A2P12110 AC090229.1-201ENST00000590983 1609 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL6A2P12110 AL139811.1-201ENST00000424779 2299 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 API5P2-201ENST00000397055 1498 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL6A2P12110 PNPT1P2-201ENST00000456768 2050 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 Y_RNA.138-201ENST00000363462 102 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 MIR585-201ENST00000384887 94 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 Z98745.1-201ENST00000402553 494 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 RPS4XP9-201ENST00000405151 780 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.57□□□□□ -1.68
COL6A2P12110 RNU4-46P-201ENST00000410818 138 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 UBE2FP1-201ENST00000416536 447 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.57□□□□□ -1.68
COL6A2P12110 EIF4EP1-201ENST00000422311 642 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 RAC1P6-201ENST00000423911 575 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 RPL23AP25-201ENST00000430973 463 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.57□□□□□ -1.68
COL6A2P12110 AL162389.1-201ENST00000449233 177 ntBASIC4.57□□□□□ -1.68
COL6A2P12110 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms