Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 OFD1P3Y-201ENST00000453312 783 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 SUMO2P2-201ENST00000456482 255 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 PNPLA4P1-201ENST00000458328 305 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.34□□□□□ -2.03
MT-ND4P03905 AC023424.2-201ENST00000493479 777 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AC104629.1-201ENST00000494226 508 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AC098799.1-201ENST00000504752 800 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.34□□□□□ -2.03
MT-ND4P03905 CDC42P4-201ENST00000510507 563 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AC093752.1-206ENST00000511823 336 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.34□□□□□ -2.03
MT-ND4P03905 AC091826.1-201ENST00000514065 313 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AC087808.1-201ENST00000520501 361 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 MTCO1P47-201ENST00000523889 1271 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AP000867.2-201ENST00000532468 320 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.34□□□□□ -2.03
MT-ND4P03905 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.34□□□□□ -2.03
MT-ND4P03905 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.34□□□□□ -2.03
MT-ND4P03905 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.34□□□□□ -2.03
MT-ND4P03905 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.34□□□□□ -2.03
MT-ND4P03905 AL031176.1-201ENST00000604554 466 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AC093673.2-201ENST00000609674 331 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AC009237.15-201ENST00000610252 501 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AL162274.2-201ENST00000614406 332 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 MIR8057-201ENST00000620957 69 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AP003476.1-201ENST00000623984 516 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AP003485.1-201ENST00000625093 753 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 MIR3651-201ENST00000630427 90 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 MIR1322-201ENST00000638013 71 ntBASIC2.34□□□□□ -2.03
MT-ND4P03905 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.34□□□□□ -2.03
MT-ND4P03905 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
MT-ND4P03905 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
MT-ND4P03905 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
MT-ND4P03905 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
MT-ND4P03905 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.04
MT-ND4P03905 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
MT-ND4P03905 AC009812.4-201ENST00000569134 1805 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MT-ND4P03905 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
MT-ND4P03905 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MT-ND4P03905 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
MT-ND4P03905 ZNF519P1-201ENST00000449011 1626 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 MIR6073-201ENST00000352083 89 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 AL356320.2-201ENST00000417263 507 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 MTND4P3-201ENST00000417829 541 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 TMEM167AP1-201ENST00000423409 219 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.33□□□□□ -2.04
MT-ND4P03905 AL671855.1-201ENST00000446875 1203 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.33□□□□□ -2.04
MT-ND4P03905 AP000852.1-201ENST00000472460 573 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 SRIP1-201ENST00000489235 288 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.33□□□□□ -2.04
MT-ND4P03905 TMEM251P1-201ENST00000503717 318 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.33□□□□□ -2.04
MT-ND4P03905 MTCYBP16-201ENST00000509187 1129 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.33□□□□□ -2.04
MT-ND4P03905 RN7SKP31-201ENST00000516354 278 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 SNORA31.15-201ENST00000516771 132 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MT-ND4P03905 MIR3912-201ENST00000577566 105 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 MIR4637-201ENST00000582405 84 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.33□□□□□ -2.04
MT-ND4P03905 AC024220.1-201ENST00000603675 484 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.33□□□□□ -2.04
MT-ND4P03905 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MT-ND4P03905 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.33□□□□□ -2.04
MT-ND4P03905 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MT-ND4P03905 AC109315.1-201ENST00000584143 1347 ntBASIC2.33□□□□□ -2.04
MT-ND4P03905 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
MT-ND4P03905 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.33□□□□□ -2.04
MT-ND4P03905 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
MT-ND4P03905 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MT-ND4P03905 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MT-ND4P03905 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
MT-ND4P03905 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MT-ND4P03905 snoZ40.1-201ENST00000364540 72 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 Y_RNA.408-201ENST00000383987 102 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 MIR23B-201ENST00000384832 97 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 RNU6-298P-201ENST00000390888 96 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 DHFRP6-201ENST00000401776 268 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 AC007435.1-201ENST00000421086 415 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 BEND7P1-201ENST00000422058 457 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 RPL35AP12-201ENST00000425362 338 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 AC092427.1-202ENST00000430569 476 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.32□□□□□ -2.04
MT-ND4P03905 AC024082.2-201ENST00000434771 238 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.32□□□□□ -2.04
MT-ND4P03905 AC112653.1-201ENST00000443851 386 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 TRGVB-201ENST00000453257 471 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 AC090453.1-201ENST00000495560 436 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.32□□□□□ -2.04
MT-ND4P03905 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.32□□□□□ -2.04
MT-ND4P03905 AC117522.3-201ENST00000507974 584 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.32□□□□□ -2.04
MT-ND4P03905 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.32□□□□□ -2.04
MT-ND4P03905 HSPE1P3-201ENST00000559254 309 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 AC015688.2-201ENST00000584523 262 ntBASIC2.32□□□□□ -2.04
MT-ND4P03905 AC060766.3-201ENST00000591442 263 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms