Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.8□□□□□ -1.8
RTN3O95197 RPL23AP83-201ENST00000434984 473 ntBASIC3.8□□□□□ -1.8
RTN3O95197 AL445567.1-201ENST00000439121 144 ntBASIC3.8□□□□□ -1.8
RTN3O95197 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.8□□□□□ -1.8
RTN3O95197 RPL21P23-201ENST00000446654 460 ntBASIC3.8□□□□□ -1.8
RTN3O95197 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.8□□□□□ -1.8
RTN3O95197 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.8□□□□□ -1.8
RTN3O95197 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.8□□□□□ -1.8
RTN3O95197 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RTN3O95197 AC109464.2-201ENST00000510242 943 ntBASIC3.8□□□□□ -1.8
RTN3O95197 AL359273.1-201ENST00000510918 627 ntBASIC3.8□□□□□ -1.8
RTN3O95197 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.8□□□□□ -1.8
RTN3O95197 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.8□□□□□ -1.8
RTN3O95197 SNORA70.16-201ENST00000516390 95 ntBASIC3.8□□□□□ -1.8
RTN3O95197 SNORA31.22-201ENST00000517204 135 ntBASIC3.8□□□□□ -1.8
RTN3O95197 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.8□□□□□ -1.8
RTN3O95197 IGHV3-76-201ENST00000522465 295 ntBASIC3.8□□□□□ -1.8
RTN3O95197 MTND2P38-201ENST00000522536 667 ntBASIC3.8□□□□□ -1.8
RTN3O95197 AL133271.1-201ENST00000538229 291 ntBASIC3.8□□□□□ -1.8
RTN3O95197 AC037471.2-201ENST00000564941 598 ntBASIC3.8□□□□□ -1.8
RTN3O95197 AC091489.2-201ENST00000566263 604 ntBASIC3.8□□□□□ -1.8
RTN3O95197 AC011260.1-201ENST00000578420 472 ntBASIC3.8□□□□□ -1.8
RTN3O95197 AC006116.10-201ENST00000591836 581 ntBASIC3.8□□□□□ -1.8
RTN3O95197 WISP1-OT1-201ENST00000602893 642 ntBASIC3.8□□□□□ -1.8
RTN3O95197 AC019176.2-201ENST00000611579 315 ntBASIC3.8□□□□□ -1.8
RTN3O95197 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.8□□□□□ -1.8
RTN3O95197 AC097655.1-201ENST00000635075 318 ntBASIC3.8□□□□□ -1.8
RTN3O95197 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.8□□□□□ -1.8
RTN3O95197 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.8□□□□□ -1.8
RTN3O95197 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTN3O95197 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.8□□□□□ -1.8
RTN3O95197 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTN3O95197 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
RTN3O95197 AC007823.1-201ENST00000569932 1566 ntBASIC3.8□□□□□ -1.8
RTN3O95197 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTN3O95197 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RTN3O95197 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RTN3O95197 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.79□□□□□ -1.8
RTN3O95197 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RTN3O95197 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTN3O95197 RNU6-432P-201ENST00000384196 109 ntBASIC3.79□□□□□ -1.8
RTN3O95197 HSPE1P8-201ENST00000406997 288 ntBASIC3.79□□□□□ -1.8
RTN3O95197 MIR1290-201ENST00000408735 78 ntBASIC3.79□□□□□ -1.8
RTN3O95197 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.79□□□□□ -1.8
RTN3O95197 YME1L1P1-201ENST00000429435 297 ntBASIC3.79□□□□□ -1.8
RTN3O95197 MED14P1-201ENST00000430517 648 ntBASIC3.79□□□□□ -1.8
RTN3O95197 AC092641.1-201ENST00000440229 772 ntBASIC3.79□□□□□ -1.8
RTN3O95197 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.79□□□□□ -1.8
RTN3O95197 TPT1P14-201ENST00000448018 505 ntBASIC3.79□□□□□ -1.8
RTN3O95197 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.79□□□□□ -1.8
RTN3O95197 AC006539.3-201ENST00000454258 129 ntBASIC3.79□□□□□ -1.8
RTN3O95197 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.79□□□□□ -1.8
RTN3O95197 AC116347.2-201ENST00000514912 523 ntBASIC3.79□□□□□ -1.8
RTN3O95197 AC106038.2-201ENST00000520706 568 ntBASIC3.79□□□□□ -1.8
RTN3O95197 FAM60DP-201ENST00000524174 632 ntBASIC3.79□□□□□ -1.8
RTN3O95197 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.79□□□□□ -1.8
RTN3O95197 OR5B10P-201ENST00000532869 642 ntBASIC3.79□□□□□ -1.8
RTN3O95197 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.79□□□□□ -1.8
RTN3O95197 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.79□□□□□ -1.8
RTN3O95197 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.79□□□□□ -1.8
RTN3O95197 OSBPL9P5-201ENST00000542581 171 ntBASIC3.79□□□□□ -1.8
RTN3O95197 OR4T1P-201ENST00000554933 911 ntBASIC3.79□□□□□ -1.8
RTN3O95197 COX6CP3-201ENST00000580869 223 ntBASIC3.79□□□□□ -1.8
RTN3O95197 MIR3944-201ENST00000581277 108 ntBASIC3.79□□□□□ -1.8
RTN3O95197 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RTN3O95197 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.79□□□□□ -1.8
RTN3O95197 AL390240.1-201ENST00000612950 384 ntBASIC3.79□□□□□ -1.8
RTN3O95197 AC244100.1-202ENST00000621554 382 ntBASIC3.79□□□□□ -1.8
RTN3O95197 AC019226.1-201ENST00000625666 515 ntBASIC3.79□□□□□ -1.8
RTN3O95197 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RTN3O95197 AL732372.2-225ENST00000642124 456 ntBASIC3.79□□□□□ -1.8
RTN3O95197 AC090740.1-201ENST00000623193 2262 ntBASIC3.79□□□□□ -1.8
RTN3O95197 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RTN3O95197 AF117829.1-206ENST00000621883 3802 ntBASIC3.79□□□□□ -1.8
RTN3O95197 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTN3O95197 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTN3O95197 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTN3O95197 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTN3O95197 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.78□□□□□ -1.8
RTN3O95197 RNU5A-1-201ENST00000362698 116 ntBASIC3.78□□□□□ -1.8
RTN3O95197 SNORD116-8-201ENST00000384365 95 ntBASIC3.78□□□□□ -1.8
RTN3O95197 HMGN1P24-201ENST00000412282 298 ntBASIC3.78□□□□□ -1.8
RTN3O95197 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTN3O95197 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.78□□□□□ -1.8
RTN3O95197 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.78□□□□□ -1.8
RTN3O95197 NDUFB1P1-201ENST00000435191 180 ntBASIC3.78□□□□□ -1.8
RTN3O95197 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.78□□□□□ -1.8
RTN3O95197 MTND1P30-201ENST00000441241 901 ntBASIC3.78□□□□□ -1.8
RTN3O95197 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.78□□□□□ -1.8
RTN3O95197 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.78□□□□□ -1.8
RTN3O95197 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.78□□□□□ -1.8
RTN3O95197 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.78□□□□□ -1.8
RTN3O95197 SETP11-201ENST00000473027 690 ntBASIC3.78□□□□□ -1.8
RTN3O95197 HSPE1P6-201ENST00000479457 291 ntBASIC3.78□□□□□ -1.8
RTN3O95197 AC092185.1-201ENST00000491371 97 ntBASIC3.78□□□□□ -1.8
RTN3O95197 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.78□□□□□ -1.8
RTN3O95197 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.78□□□□□ -1.8
RTN3O95197 RNU6-579P-201ENST00000516879 102 ntBASIC3.78□□□□□ -1.8
RTN3O95197 MTCO1P47-201ENST00000523889 1271 ntBASIC3.78□□□□□ -1.8
RTN3O95197 AC103843.2-201ENST00000530523 682 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms