Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VAMP4O75379 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.15□□□□□ -1.58
VAMP4O75379 AC006020.1-201ENST00000420179 1854 ntBASIC5.15□□□□□ -1.58
VAMP4O75379 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VAMP4O75379 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
VAMP4O75379 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
VAMP4O75379 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VAMP4O75379 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.15□□□□□ -1.58
VAMP4O75379 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VAMP4O75379 Y_RNA.255-201ENST00000364581 97 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 RNA5SP479-201ENST00000364858 117 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 RNU6-1279P-201ENST00000383917 103 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 MIR1-2-201ENST00000384961 85 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 AL136116.1-201ENST00000403591 381 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 AL356432.1-201ENST00000405809 419 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 RPL31P2-201ENST00000413849 377 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 RPL23AP30-201ENST00000432419 501 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 RPL21P89-201ENST00000444021 467 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 AC007677.1-201ENST00000445757 515 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.15□□□□□ -1.59
VAMP4O75379 AL162151.2-201ENST00000448875 158 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 AC140076.1-201ENST00000449897 361 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.15□□□□□ -1.59
VAMP4O75379 RNU7-63P-201ENST00000459054 62 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 RN7SL271P-201ENST00000487601 295 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 RPL38P4-201ENST00000502376 214 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 HMGB1P19-201ENST00000517578 577 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.15□□□□□ -1.59
VAMP4O75379 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.15□□□□□ -1.59
VAMP4O75379 AC022790.1-201ENST00000522872 204 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 AC022690.1-201ENST00000526681 550 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 AP003497.1-201ENST00000528472 562 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 OR5BN1P-201ENST00000532955 829 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.15□□□□□ -1.59
VAMP4O75379 AC243972.3-201ENST00000539655 198 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.15□□□□□ -1.59
VAMP4O75379 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.15□□□□□ -1.59
VAMP4O75379 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.15□□□□□ -1.59
VAMP4O75379 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.15□□□□□ -1.59
VAMP4O75379 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.15□□□□□ -1.59
VAMP4O75379 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.15□□□□□ -1.59
VAMP4O75379 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.15□□□□□ -1.59
VAMP4O75379 MIR6798-201ENST00000612887 67 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.15□□□□□ -1.59
VAMP4O75379 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VAMP4O75379 AL596275.2-204ENST00000641628 552 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 AL596275.2-206ENST00000641957 626 ntBASIC5.15□□□□□ -1.59
VAMP4O75379 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
VAMP4O75379 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
VAMP4O75379 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VAMP4O75379 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.14□□□□□ -1.59
VAMP4O75379 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.14□□□□□ -1.59
VAMP4O75379 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.14□□□□□ -1.59
VAMP4O75379 AC007529.1-201ENST00000418574 2178 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VAMP4O75379 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VAMP4O75379 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VAMP4O75379 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VAMP4O75379 RPL35AP12-201ENST00000425362 338 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 SRIP2-201ENST00000428470 166 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 AL365400.1-201ENST00000431854 640 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 TIMM9P1-201ENST00000436122 256 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 AC104308.1-201ENST00000454621 333 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 AC022034.3-201ENST00000471393 478 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.14□□□□□ -1.59
VAMP4O75379 RPL31P61-201ENST00000496160 376 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.14□□□□□ -1.59
VAMP4O75379 AC021146.1-201ENST00000511202 716 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 SCARNA24.1-201ENST00000516465 137 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.14□□□□□ -1.59
VAMP4O75379 AC024224.1-201ENST00000538284 609 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 AC091516.1-201ENST00000549191 703 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.14□□□□□ -1.59
VAMP4O75379 AC105224.1-201ENST00000587055 421 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 AL451044.1-201ENST00000604867 238 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 AL354950.2-201ENST00000617939 290 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 AL731566.2-201ENST00000618971 317 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
VAMP4O75379 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VAMP4O75379 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VAMP4O75379 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.14□□□□□ -1.59
VAMP4O75379 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VAMP4O75379 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VAMP4O75379 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.14□□□□□ -1.59
VAMP4O75379 AC026951.1-201ENST00000559530 2459 ntBASIC5.14□□□□□ -1.59
VAMP4O75379 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VAMP4O75379 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VAMP4O75379 IQCB2P-201ENST00000401788 1633 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VAMP4O75379 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VAMP4O75379 SNORD82-201ENST00000365530 70 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 MTCO3P12-201ENST00000416718 547 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.13□□□□□ -1.59
VAMP4O75379 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.13□□□□□ -1.59
VAMP4O75379 AC083863.1-201ENST00000438811 231 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 RPL7P12-201ENST00000446719 750 ntBASIC5.13□□□□□ -1.59
VAMP4O75379 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.13□□□□□ -1.59
VAMP4O75379 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.13□□□□□ -1.59
VAMP4O75379 CACYBPP2-201ENST00000453625 678 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms