Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX3O60493 AC109486.1-201ENST00000486833 374 ntBASIC3.21□□□□□ -1.9
SNX3O60493 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX3O60493 VN1R104P-201ENST00000505115 1009 ntBASIC3.21□□□□□ -1.9
SNX3O60493 AC010486.3-201ENST00000511602 785 ntBASIC3.21□□□□□ -1.9
SNX3O60493 AC105914.1-201ENST00000511798 226 ntBASIC3.21□□□□□ -1.9
SNX3O60493 AC118465.1-201ENST00000513820 1271 ntBASIC3.21□□□□□ -1.9
SNX3O60493 RN7SKP21-201ENST00000516503 220 ntBASIC3.21□□□□□ -1.9
SNX3O60493 SNORA31.22-201ENST00000517204 135 ntBASIC3.21□□□□□ -1.9
SNX3O60493 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX3O60493 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX3O60493 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.21□□□□□ -1.9
SNX3O60493 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX3O60493 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX3O60493 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX3O60493 AP001029.3-201ENST00000588063 596 ntBASIC3.21□□□□□ -1.9
SNX3O60493 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX3O60493 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SNX3O60493 AC006116.10-201ENST00000591836 581 ntBASIC3.21□□□□□ -1.9
SNX3O60493 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX3O60493 AC092354.1-201ENST00000606057 376 ntBASIC3.21□□□□□ -1.9
SNX3O60493 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX3O60493 MIR6716-201ENST00000613413 80 ntBASIC3.21□□□□□ -1.9
SNX3O60493 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX3O60493 AC009268.2-201ENST00000621925 457 ntBASIC3.21□□□□□ -1.9
SNX3O60493 AC112204.3-201ENST00000623822 332 ntBASIC3.21□□□□□ -1.9
SNX3O60493 AC068057.2-201ENST00000624047 895 ntBASIC3.21□□□□□ -1.9
SNX3O60493 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX3O60493 AC093591.3-201ENST00000634516 308 ntBASIC3.21□□□□□ -1.9
SNX3O60493 MIR3974-201ENST00000637126 96 ntBASIC3.21□□□□□ -1.9
SNX3O60493 AC244258.1-201ENST00000637553 1071 ntBASIC3.21□□□□□ -1.9
SNX3O60493 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.21□□□□□ -1.9
SNX3O60493 ZNF833P-201ENST00000424938 1494 ntBASIC3.21□□□□□ -1.9
SNX3O60493 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNX3O60493 AL672296.1-201ENST00000427780 2158 ntBASIC3.21□□□□□ -1.9
SNX3O60493 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
SNX3O60493 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SNX3O60493 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX3O60493 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.2□□□□□ -1.9
SNX3O60493 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.2□□□□□ -1.9
SNX3O60493 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SNX3O60493 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SNX3O60493 RNU6-76P-201ENST00000384060 104 ntBASIC3.2□□□□□ -1.9
SNX3O60493 RNU6-809P-201ENST00000384461 107 ntBASIC3.2□□□□□ -1.9
SNX3O60493 RNU6-516P-201ENST00000411381 104 ntBASIC3.2□□□□□ -1.9
SNX3O60493 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.2□□□□□ -1.9
SNX3O60493 ATP5A1P2-201ENST00000412323 255 ntBASIC3.2□□□□□ -1.9
SNX3O60493 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX3O60493 PPP1R11P2-201ENST00000423543 382 ntBASIC3.2□□□□□ -1.9
SNX3O60493 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX3O60493 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX3O60493 MED14P1-201ENST00000430517 648 ntBASIC3.2□□□□□ -1.9
SNX3O60493 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX3O60493 ATP5C1P1-201ENST00000441945 895 ntBASIC3.2□□□□□ -1.9
SNX3O60493 BMI1P1-201ENST00000445879 941 ntBASIC3.2□□□□□ -1.9
SNX3O60493 TPT1P14-201ENST00000448018 505 ntBASIC3.2□□□□□ -1.9
SNX3O60493 RPS27AP8-201ENST00000452665 445 ntBASIC3.2□□□□□ -1.9
SNX3O60493 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.2□□□□□ -1.9
SNX3O60493 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SNX3O60493 RPL7P19-201ENST00000469948 618 ntBASIC3.2□□□□□ -1.9
SNX3O60493 AC078785.3-201ENST00000476607 425 ntBASIC3.2□□□□□ -1.9
SNX3O60493 AC109464.2-201ENST00000510242 943 ntBASIC3.2□□□□□ -1.9
SNX3O60493 AF131216.2-201ENST00000512316 564 ntBASIC3.2□□□□□ -1.9
SNX3O60493 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX3O60493 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX3O60493 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX3O60493 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.2□□□□□ -1.9
SNX3O60493 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.2□□□□□ -1.9
SNX3O60493 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX3O60493 OR4T1P-201ENST00000554933 911 ntBASIC3.2□□□□□ -1.9
SNX3O60493 TPMTP1-201ENST00000592307 737 ntBASIC3.2□□□□□ -1.9
SNX3O60493 AF131215.7-201ENST00000602443 707 ntBASIC3.2□□□□□ -1.9
SNX3O60493 AC011468.4-201ENST00000603942 409 ntBASIC3.2□□□□□ -1.9
SNX3O60493 AC106900.2-201ENST00000604994 317 ntBASIC3.2□□□□□ -1.9
SNX3O60493 AL031775.1-201ENST00000607014 887 ntBASIC3.2□□□□□ -1.9
SNX3O60493 AC004067.1-201ENST00000608733 700 ntBASIC3.2□□□□□ -1.9
SNX3O60493 MIR8058-201ENST00000615737 89 ntBASIC3.2□□□□□ -1.9
SNX3O60493 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SNX3O60493 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SNX3O60493 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SNX3O60493 RNU5F-7P-201ENST00000363696 115 ntBASIC3.19□□□□□ -1.9
SNX3O60493 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
SNX3O60493 MT-TH-201ENST00000387441 69 ntBASIC3.19□□□□□ -1.9
SNX3O60493 RPS20P2-201ENST00000402520 389 ntBASIC3.19□□□□□ -1.9
SNX3O60493 RNA5SP317-201ENST00000410176 116 ntBASIC3.19□□□□□ -1.9
SNX3O60493 RNA5SP311-201ENST00000411290 116 ntBASIC3.19□□□□□ -1.9
SNX3O60493 AC078974.1-201ENST00000411597 223 ntBASIC3.19□□□□□ -1.9
SNX3O60493 MTND1P21-201ENST00000412991 285 ntBASIC3.19□□□□□ -1.9
SNX3O60493 AC090960.1-201ENST00000421072 306 ntBASIC3.19□□□□□ -1.9
SNX3O60493 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.19□□□□□ -1.9
SNX3O60493 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.19□□□□□ -1.9
SNX3O60493 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX3O60493 AL390023.1-201ENST00000428836 262 ntBASIC3.19□□□□□ -1.9
SNX3O60493 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX3O60493 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX3O60493 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX3O60493 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX3O60493 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX3O60493 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX3O60493 RNA5SP315-201ENST00000516340 116 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms