Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RPL26P6-201ENST00000440913 438 ntBASIC3.36□□□□□ -1.87
SSX4O60224 AL049734.2-201ENST00000441066 616 ntBASIC3.36□□□□□ -1.87
SSX4O60224 TAF9P1-201ENST00000445421 515 ntBASIC3.36□□□□□ -1.87
SSX4O60224 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.36□□□□□ -1.87
SSX4O60224 USP9YP12-201ENST00000450481 570 ntBASIC3.36□□□□□ -1.87
SSX4O60224 TAF9P2-201ENST00000454958 515 ntBASIC3.36□□□□□ -1.87
SSX4O60224 RPS4XP13-201ENST00000483219 789 ntBASIC3.36□□□□□ -1.87
SSX4O60224 AC020893.1-201ENST00000502452 580 ntBASIC3.36□□□□□ -1.87
SSX4O60224 HMGB3P15-201ENST00000507326 574 ntBASIC3.36□□□□□ -1.87
SSX4O60224 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.36□□□□□ -1.87
SSX4O60224 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.36□□□□□ -1.87
SSX4O60224 MTCO2P32-201ENST00000514865 403 ntBASIC3.36□□□□□ -1.87
SSX4O60224 Y_RNA.695-201ENST00000516715 107 ntBASIC3.36□□□□□ -1.87
SSX4O60224 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.36□□□□□ -1.87
SSX4O60224 IGKV2D-19-201ENST00000523346 262 ntBASIC3.36□□□□□ -1.87
SSX4O60224 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.36□□□□□ -1.87
SSX4O60224 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.36□□□□□ -1.87
SSX4O60224 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.36□□□□□ -1.87
SSX4O60224 AC080013.6-201ENST00000606185 215 ntBASIC3.36□□□□□ -1.87
SSX4O60224 SNORA51-201ENST00000606420 132 ntBASIC3.36□□□□□ -1.87
SSX4O60224 AC004067.1-201ENST00000608733 700 ntBASIC3.36□□□□□ -1.87
SSX4O60224 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.36□□□□□ -1.87
SSX4O60224 AL159972.1-201ENST00000625150 448 ntBASIC3.36□□□□□ -1.87
SSX4O60224 AC019226.1-201ENST00000625666 515 ntBASIC3.36□□□□□ -1.87
SSX4O60224 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.36□□□□□ -1.87
SSX4O60224 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.36□□□□□ -1.87
SSX4O60224 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSX4O60224 AC138915.3-201ENST00000562908 1389 ntBASIC3.36□□□□□ -1.87
SSX4O60224 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.36□□□□□ -1.87
SSX4O60224 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSX4O60224 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSX4O60224 AL138713.1-201ENST00000624026 2130 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AP004289.2-201ENST00000444413 1457 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AC091152.2-201ENST00000591628 2569 ntBASIC3.35□□□□□ -1.87
SSX4O60224 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SSX4O60224 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SSX4O60224 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSX4O60224 RNU6-50P-201ENST00000362356 103 ntBASIC3.35□□□□□ -1.87
SSX4O60224 Y_RNA.333-201ENST00000365274 102 ntBASIC3.35□□□□□ -1.87
SSX4O60224 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
SSX4O60224 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.35□□□□□ -1.87
SSX4O60224 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SSX4O60224 DEFB109C-201ENST00000382575 264 ntBASIC3.35□□□□□ -1.87
SSX4O60224 DEFB109B-201ENST00000382656 264 ntBASIC3.35□□□□□ -1.87
SSX4O60224 RNU6-432P-201ENST00000384196 109 ntBASIC3.35□□□□□ -1.87
SSX4O60224 SNORD115.1-201ENST00000391109 76 ntBASIC3.35□□□□□ -1.87
SSX4O60224 RNU6-754P-201ENST00000391166 107 ntBASIC3.35□□□□□ -1.87
SSX4O60224 Y_RNA.608-201ENST00000410647 95 ntBASIC3.35□□□□□ -1.87
SSX4O60224 RN7SKP142-201ENST00000411236 328 ntBASIC3.35□□□□□ -1.87
SSX4O60224 HMGN1P24-201ENST00000412282 298 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.35□□□□□ -1.87
SSX4O60224 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.35□□□□□ -1.87
SSX4O60224 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SSX4O60224 USP9YP13-201ENST00000417797 480 ntBASIC3.35□□□□□ -1.87
SSX4O60224 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.35□□□□□ -1.87
SSX4O60224 RPL31P12-201ENST00000422587 358 ntBASIC3.35□□□□□ -1.87
SSX4O60224 PPP1R11P2-201ENST00000423543 382 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.35□□□□□ -1.87
SSX4O60224 NEK4P1-201ENST00000433383 879 ntBASIC3.35□□□□□ -1.87
SSX4O60224 MTCO2P16-201ENST00000436962 677 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AC092641.1-201ENST00000440229 772 ntBASIC3.35□□□□□ -1.87
SSX4O60224 RABEPKP1-201ENST00000440529 1026 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSX4O60224 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.35□□□□□ -1.87
SSX4O60224 AP000936.2-201ENST00000447151 681 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.35□□□□□ -1.87
SSX4O60224 NANOGP10-201ENST00000453325 895 ntBASIC3.35□□□□□ -1.87
SSX4O60224 HMGN2P16-201ENST00000456802 261 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.35□□□□□ -1.87
SSX4O60224 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.35□□□□□ -1.87
SSX4O60224 AC108860.1-201ENST00000484521 383 ntBASIC3.35□□□□□ -1.87
SSX4O60224 FCF1P3-201ENST00000496394 590 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AC135721.1-201ENST00000497954 479 ntBASIC3.35□□□□□ -1.87
SSX4O60224 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.35□□□□□ -1.87
SSX4O60224 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.35□□□□□ -1.87
SSX4O60224 CBX3P3-201ENST00000508108 532 ntBASIC3.35□□□□□ -1.87
SSX4O60224 RNA5SP468-201ENST00000516782 93 ntBASIC3.35□□□□□ -1.87
SSX4O60224 RNU6-201P-201ENST00000517100 61 ntBASIC3.35□□□□□ -1.87
SSX4O60224 SNORA31.22-201ENST00000517204 135 ntBASIC3.35□□□□□ -1.87
SSX4O60224 DEFB108D-201ENST00000527787 222 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AC123904.2-201ENST00000548059 300 ntBASIC3.35□□□□□ -1.87
SSX4O60224 CCNG2P1-201ENST00000549521 1000 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AL845331.3-202ENST00000562856 261 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.35□□□□□ -1.87
SSX4O60224 BDH2P1-201ENST00000602288 736 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AC011468.4-201ENST00000603942 409 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AC112191.3-201ENST00000604371 277 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AL391813.2-201ENST00000609113 322 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AC069200.1-201ENST00000609511 323 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AC005344.1-201ENST00000613391 459 ntBASIC3.35□□□□□ -1.87
SSX4O60224 AC009159.1-201ENST00000618386 642 ntBASIC3.35□□□□□ -1.87
SSX4O60224 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.35□□□□□ -1.87
SSX4O60224 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
SSX4O60224 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSX4O60224 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.34□□□□□ -1.87
SSX4O60224 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
SSX4O60224 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SSX4O60224 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.34□□□□□ -1.87
SSX4O60224 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSX4O60224 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms