Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.43□□□□□ -1.7
PRPF3O43395 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.43□□□□□ -1.7
PRPF3O43395 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF3O43395 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PRPF3O43395 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF3O43395 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.43□□□□□ -1.7
PRPF3O43395 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF3O43395 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PRPF3O43395 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF3O43395 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRPF3O43395 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PRPF3O43395 RNU6-600P-201ENST00000362524 99 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 U3.11-201ENST00000364476 212 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 RNA5SP479-201ENST00000364858 117 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF3O43395 AL031779.1-201ENST00000415663 330 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF3O43395 SSXP9-201ENST00000417503 292 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF3O43395 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF3O43395 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF3O43395 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF3O43395 AC016696.1-201ENST00000446949 318 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF3O43395 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.42□□□□□ -1.7
PRPF3O43395 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF3O43395 AL359385.1-201ENST00000456509 365 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.42□□□□□ -1.7
PRPF3O43395 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.42□□□□□ -1.7
PRPF3O43395 SNORD97-201ENST00000459187 142 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF3O43395 AC138853.1-201ENST00000503549 823 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF3O43395 AC010587.1-201ENST00000505809 469 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRPF3O43395 AL359273.1-201ENST00000510918 627 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 RAC1P2-201ENST00000511164 579 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRPF3O43395 AC010493.1-201ENST00000513479 292 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF3O43395 AC107934.1-201ENST00000522215 217 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 AP003072.2-201ENST00000527756 676 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.42□□□□□ -1.7
PRPF3O43395 AL391840.1-201ENST00000571144 367 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 MIR1254-2-201ENST00000579553 63 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 ZNF415P1-201ENST00000582279 1166 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 AL022154.1-201ENST00000604698 785 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 AL137849.1-201ENST00000604767 169 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 AC004067.1-201ENST00000608733 700 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 AC024941.1-201ENST00000612250 334 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 AC008121.2-201ENST00000614647 523 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 SNHG22-203ENST00000617833 660 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF3O43395 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF3O43395 AC110994.2-201ENST00000635481 492 ntBASIC4.42□□□□□ -1.7
PRPF3O43395 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PRPF3O43395 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRPF3O43395 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRPF3O43395 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF3O43395 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF3O43395 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF3O43395 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.41□□□□□ -1.7
PRPF3O43395 AL137003.2-201ENST00000606924 2538 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PRPF3O43395 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF3O43395 FAM35DP-201ENST00000323387 2712 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.41□□□□□ -1.7
PRPF3O43395 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PRPF3O43395 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF3O43395 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF3O43395 MIR30B-201ENST00000384850 88 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 RNU6-192P-201ENST00000391253 100 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 RNU2-37P-201ENST00000410695 177 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PRPF3O43395 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF3O43395 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.41□□□□□ -1.7
PRPF3O43395 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.41□□□□□ -1.7
PRPF3O43395 AL356867.1-201ENST00000429623 299 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.41□□□□□ -1.7
PRPF3O43395 AC005094.1-201ENST00000440420 368 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 RPS15AP36-201ENST00000492022 382 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 AC105914.1-201ENST00000511798 226 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.41□□□□□ -1.7
PRPF3O43395 RNA5SP164-201ENST00000516533 110 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.41□□□□□ -1.7
PRPF3O43395 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.41□□□□□ -1.7
PRPF3O43395 SUMO2P20-201ENST00000520803 283 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 AC022695.1-201ENST00000522089 237 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 AP003181.2-201ENST00000528941 181 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF3O43395 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.41□□□□□ -1.7
PRPF3O43395 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.41□□□□□ -1.7
PRPF3O43395 AC020914.4-201ENST00000597690 277 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 BNIP3P33-201ENST00000598912 569 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 AL606834.2-201ENST00000602954 668 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 SNORA62.6-201ENST00000606322 83 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 AC008498.1-201ENST00000613012 531 ntBASIC4.41□□□□□ -1.7
PRPF3O43395 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF3O43395 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRPF3O43395 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms