Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MIR708-201ENST00000390708 88 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 AL359634.1-202ENST00000404721 284 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 SNORA3C-201ENST00000408792 125 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 RNA5SP239-201ENST00000410218 129 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.1□□□□□ -1.75
PHGDHO43175 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PHGDHO43175 AL596276.1-201ENST00000434465 418 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 RPS15AP9-201ENST00000439856 381 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 AC027673.1-201ENST00000456245 405 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PHGDHO43175 AC008958.1-201ENST00000511047 682 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 Y_RNA.693-201ENST00000516641 110 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 Y_RNA.704-201ENST00000516851 102 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.1□□□□□ -1.75
PHGDHO43175 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.1□□□□□ -1.75
PHGDHO43175 AC093012.1-202ENST00000549403 582 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.1□□□□□ -1.75
PHGDHO43175 RPL23AP87-202ENST00000573039 466 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 MIR4330-201ENST00000579077 105 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 AL109618.2-201ENST00000605527 211 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 AC007390.2-201ENST00000606229 3803 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 AL121992.2-201ENST00000606262 256 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.1□□□□□ -1.75
PHGDHO43175 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.1□□□□□ -1.75
PHGDHO43175 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.1□□□□□ -1.75
PHGDHO43175 AL773545.4-201ENST00000637262 310 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.1□□□□□ -1.75
PHGDHO43175 AL513478.4-201ENST00000641636 310 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 GABPAP-201ENST00000419271 1356 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PHGDHO43175 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.1□□□□□ -1.75
PHGDHO43175 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHGDHO43175 AC116667.1-201ENST00000604855 2072 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.09□□□□□ -1.75
PHGDHO43175 Y_RNA.22-201ENST00000362492 102 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 RNU5A-1-201ENST00000362698 116 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 RNU1-132P-201ENST00000364300 164 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 SNORA51.2-201ENST00000364595 132 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 Y_RNA.367-201ENST00000365544 101 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PHGDHO43175 Y_RNA.481-201ENST00000384373 102 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 AC008850.1-201ENST00000427546 362 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.09□□□□□ -1.75
PHGDHO43175 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PHGDHO43175 RPL23AP46-201ENST00000438548 490 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.09□□□□□ -1.75
PHGDHO43175 GAPDHP27-201ENST00000447427 1020 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.09□□□□□ -1.75
PHGDHO43175 RN7SL738P-201ENST00000470264 297 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 AC092989.1-201ENST00000481235 277 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 RPL31P13-201ENST00000484151 370 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 VN1R105P-201ENST00000486595 910 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.09□□□□□ -1.75
PHGDHO43175 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.09□□□□□ -1.75
PHGDHO43175 AC026427.2-201ENST00000506228 536 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.09□□□□□ -1.75
PHGDHO43175 AC134698.4-201ENST00000523451 826 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.09□□□□□ -1.75
PHGDHO43175 AC092325.1-201ENST00000566449 554 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PHGDHO43175 AC020914.4-201ENST00000597690 277 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.09□□□□□ -1.75
PHGDHO43175 AL161729.3-201ENST00000603533 673 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 AL136295.6-201ENST00000610486 658 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 AL355810.1-201ENST00000614629 552 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 SDR42E1P2-201ENST00000614861 481 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 AC007014.2-201ENST00000615581 479 ntBASIC4.09□□□□□ -1.75
PHGDHO43175 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.09□□□□□ -1.75
PHGDHO43175 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.09□□□□□ -1.75
PHGDHO43175 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.09□□□□□ -1.75
PHGDHO43175 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.75
PHGDHO43175 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.75
PHGDHO43175 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
PHGDHO43175 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
PHGDHO43175 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PHGDHO43175 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PHGDHO43175 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.08□□□□□ -1.76
PHGDHO43175 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.08□□□□□ -1.76
PHGDHO43175 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PHGDHO43175 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PHGDHO43175 AC073343.1-201ENST00000328239 651 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PHGDHO43175 RNU6-188P-201ENST00000364207 107 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PHGDHO43175 Y_RNA.402-201ENST00000383972 102 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 RNU6-74P-201ENST00000384235 107 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 AC068050.1-201ENST00000394891 380 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 RPS4XP8-201ENST00000402039 771 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 AL603766.1-201ENST00000407763 664 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 RNU2-39P-201ENST00000410604 198 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 ELOCP19-201ENST00000411919 318 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PHGDHO43175 HMGB3P20-201ENST00000417997 600 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 ZNF680P1-201ENST00000436625 1469 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 RPL7P54-201ENST00000438336 674 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 BNIP3P2-201ENST00000441221 577 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 AC006011.1-201ENST00000442758 349 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 HMGB3P22-202ENST00000451823 572 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 RPS7P7-201ENST00000463499 571 ntBASIC4.08□□□□□ -1.76
PHGDHO43175 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms