Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AL353778.1-201ENST00000603149 408 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AC243773.3-201ENST00000613270 256 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AC009159.2-201ENST00000617603 606 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AC005858.4-201ENST00000623191 700 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 AP002791.1-201ENST00000623291 381 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 MIR4278-201ENST00000636094 69 ntBASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.27□□□□□ -2.05
TRAV40A0A0B4J280 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AL022578.1-201ENST00000439330 1433 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 RNU6-621P-201ENST00000364752 109 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 Y_RNA.311-201ENST00000365068 96 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 RNU6-157P-201ENST00000383957 107 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 MIR506-201ENST00000384998 124 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 RPS4XP8-201ENST00000402039 771 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 TMSB4XP8-201ENST00000402089 135 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AL138827.1-201ENST00000402666 306 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AL138880.1-201ENST00000405824 642 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 RNU2-47P-201ENST00000410649 186 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 RNU2-52P-201ENST00000410680 190 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 PIGPP2-201ENST00000411569 458 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 TMSB4XP6-201ENST00000415187 135 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 RPL7P30-201ENST00000420888 709 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 TMSB4XP1-201ENST00000424567 135 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC006548.1-201ENST00000427470 102 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 MTND1P32-201ENST00000433043 938 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AL138799.3-201ENST00000438968 350 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AL109933.2-201ENST00000452651 260 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 OFD1P3Y-201ENST00000453312 783 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 HMGB3P30-201ENST00000457863 606 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 RNU7-136P-201ENST00000458819 69 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC026410.2-201ENST00000460281 156 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC010587.2-201ENST00000511727 448 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 MTCYBP41-201ENST00000528913 1123 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 HPRT1P3-201ENST00000539521 576 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC010198.2-201ENST00000550612 259 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 NBEAP1-201ENST00000554452 979 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC090888.2-201ENST00000559765 1144 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC090695.1-201ENST00000561269 1222 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 VN1R78P-201ENST00000597393 564 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC013244.3-201ENST00000605614 388 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC087683.2-201ENST00000611384 326 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC048347.1-201ENST00000624621 427 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 CR381572.1-201ENST00000625098 102 ntBASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TRAV40A0A0B4J280 AL157700.1-201ENST00000561973 1432 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AP000526.1-201ENST00000603308 1388 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AL161431.1-201ENST00000618966 4205 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 RNU1-35P-201ENST00000362782 153 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 SNORD113-6-201ENST00000363345 75 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 RNU6-712P-201ENST00000410558 100 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 RPL22P18-201ENST00000417197 377 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AL139421.1-201ENST00000423010 169 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AL590233.1-201ENST00000430017 456 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AL591719.1-201ENST00000444669 744 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 Z73417.1-201ENST00000447373 778 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 RPL36AP33-201ENST00000450395 310 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 BX322784.1-201ENST00000455793 1077 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 RPS20P24-201ENST00000457473 361 ntBASIC2.25□□□□□ -2.05
TRAV40A0A0B4J280 RPL21P41-201ENST00000459863 264 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms