Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 RNA5SP139-201ENST00000364340 117 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 Z75741.2-201ENST00000417272 1167 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 OR4K11P-201ENST00000431829 904 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 HMGB1P18-201ENST00000438801 619 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AL034418.1-201ENST00000448675 860 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AC015908.1-201ENST00000478739 476 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AC090096.1-201ENST00000489168 390 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AC091917.2-201ENST00000505002 744 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 SNORD116-30-201ENST00000516468 85 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 IGKV2D-36-201ENST00000518643 226 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AK6P1-201ENST00000540219 478 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AC087481.2-201ENST00000565492 330 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AMZ2P1-203ENST00000565833 850 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 MIR5089-201ENST00000580047 84 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 OR4G1P-201ENST00000588632 938 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AC010615.3-201ENST00000597319 394 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 MIR6076-201ENST00000617521 113 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AP005901.5-201ENST00000545779 1796 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AC005336.3-201ENST00000623833 2679 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 NSRP1P1-201ENST00000444067 1693 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AC244517.1-201ENST00000606030 2086 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 MTND5P28-201ENST00000438005 1594 ntBASIC1.76□□□□□ -2.13
TRAV17A0A0B4J275 AC090740.1-201ENST00000623193 2262 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 RNU6-837P-201ENST00000391056 108 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 MTATP6P31-201ENST00000406985 692 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 U3.37-201ENST00000408528 213 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 RNA5SP56-201ENST00000410277 118 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 EIF1AXP1-201ENST00000419267 435 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 FNDC3CP-201ENST00000420795 1155 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 CYCSP49-201ENST00000420810 319 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 OFD1P18Y-201ENST00000420889 959 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 RPL7P37-201ENST00000425095 738 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AL513321.1-201ENST00000441175 761 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 USP9YP8-201ENST00000441913 500 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AL031183.1-201ENST00000457667 207 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AC025033.1-201ENST00000463883 194 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AC133963.2-201ENST00000513686 578 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AC004923.2-201ENST00000529649 369 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 OR4K7P-201ENST00000580232 945 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 U73023.1-201ENST00000603134 700 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AC106791.2-201ENST00000604680 391 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AL590410.1-201ENST00000617925 333 ntBASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
TRAV17A0A0B4J275 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 RNU1-17P-201ENST00000363022 152 ntBASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 SET-203ENST00000372688 801 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 TAS2R15P-201ENST00000390674 928 ntBASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 AC096533.1-201ENST00000411645 353 ntBASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 MTND1P23-201ENST00000416931 372 ntBASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 SRIP2-201ENST00000428470 166 ntBASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 AL645638.1-201ENST00000440519 361 ntBASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 AL031659.1-201ENST00000447075 539 ntBASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 AL590664.1-201ENST00000448065 339 ntBASIC1.74□□□□□ -2.13
TRAV17A0A0B4J275 RNA5SP310-201ENST00000459084 116 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms