Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC110079.1-202ENST00000635213 138 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
TRAV1-2A0A0B4J238 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 UBE2L2-201ENST00000254302 429 ntBASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 RPL7P27-201ENST00000403775 720 ntBASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 AL023807.1-201ENST00000407932 359 ntBASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 RN7SKP101-201ENST00000411376 320 ntBASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 AL445183.3-201ENST00000414168 502 ntBASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 Z85995.1-201ENST00000415547 335 ntBASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 AC025768.1-201ENST00000510057 267 ntBASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 RNA5SP471-201ENST00000516971 106 ntBASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 AC087481.2-201ENST00000565492 330 ntBASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 UBE2L4-201ENST00000587688 464 ntBASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 HPVC1-201ENST00000629899 1198 ntBASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 MTND4P31-201ENST00000425607 1343 ntBASIC1.4□□□□□ -2.19
TRAV1-2A0A0B4J238 AC130650.2-201ENST00000618736 2403 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 ZNF876P-202ENST00000398732 1485 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 RNU6-997P-201ENST00000384725 107 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AC105402.1-201ENST00000413336 545 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 NDUFA5P10-201ENST00000432147 357 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AL645638.1-201ENST00000440519 361 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AL513321.1-201ENST00000441175 761 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 BUD31P2-201ENST00000449374 300 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 RPL31P53-201ENST00000457065 348 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 RPL30P14-201ENST00000482744 348 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AC109471.1-201ENST00000511631 612 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AC108043.1-201ENST00000512696 574 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AC133963.2-201ENST00000513686 578 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 MIR4255-201ENST00000579351 72 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AC095031.1-201ENST00000623685 672 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AC012640.5-201ENST00000623897 319 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 AC091932.3-201ENST00000624223 323 ntBASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV1-2A0A0B4J238 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 SNORD56-201ENST00000413522 71 ntBASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 AC007098.1-201ENST00000420122 367 ntBASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 AC006946.1-201ENST00000429106 328 ntBASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 OR4K11P-201ENST00000431829 904 ntBASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 MTCYBP34-201ENST00000439552 670 ntBASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 AL360221.1-201ENST00000445989 335 ntBASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 HMGB1P48-201ENST00000446155 598 ntBASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 AC021146.7-201ENST00000509604 775 ntBASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 IGKV2D-36-201ENST00000518643 226 ntBASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 HSPE1P7-201ENST00000604681 321 ntBASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 AL355810.1-201ENST00000614629 552 ntBASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV1-2A0A0B4J238 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 Z98749.2-208ENST00000381646 500 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 SNORA1.3-201ENST00000384676 136 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 RNU6-837P-201ENST00000391056 108 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 RPS4XP3-201ENST00000398541 413 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 SNORA3.2-201ENST00000408221 125 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 AL356320.2-201ENST00000417263 507 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 RPL7P30-201ENST00000420888 709 ntBASIC1.37□□□□□ -2.19
TRAV1-2A0A0B4J238 BX510359.4-201ENST00000423750 193 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms