Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 MTND1P9-201ENST00000453775 944 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 AC092798.1-201ENST00000458542 409 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 RNU6-798P-201ENST00000516912 103 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 AP006245.1-201ENST00000522549 120 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 COX6CP8-201ENST00000522620 226 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 CASP1P1-201ENST00000526345 212 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 AC125611.2-201ENST00000551907 647 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 DUXAP6-201ENST00000553858 601 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 EIF4BP1-201ENST00000554881 351 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 CYCSP2-201ENST00000558168 301 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 AC023813.2-201ENST00000564321 469 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 AC009712.1-201ENST00000564938 316 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 AC012493.2-201ENST00000595083 291 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 BNIP3P38-201ENST00000601117 544 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 NUTF2P8-201ENST00000604593 363 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 AC004067.1-201ENST00000608733 700 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 AC097478.2-201ENST00000610572 514 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 AL355365.1-201ENST00000616480 294 ntBASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.17□□□□□ -1.9
RPH3AQ9Y2J0 MFSD8-233ENST00000641482 4860 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 DDX43P2-201ENST00000604753 1354 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 RNU6-97P-201ENST00000363387 104 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AC005300.1-201ENST00000428401 373 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AL357552.1-201ENST00000445254 415 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AC002381.1-201ENST00000447049 280 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AC006539.3-201ENST00000454258 129 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 SNORD11.1-201ENST00000459482 85 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 RPL21P10-201ENST00000463521 490 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 RNU6-150P-201ENST00000516237 95 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 SNORA31.22-201ENST00000517204 135 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 OR5G4P-201ENST00000525251 760 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AC239860.2-201ENST00000525886 270 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AC026333.2-201ENST00000542164 106 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AC004832.5-201ENST00000608677 401 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AC009974.1-201ENST00000608881 455 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AC013470.4-201ENST00000619978 986 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AC008443.7-201ENST00000622195 246 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 AL078595.3-201ENST00000623815 1166 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 GABRG2-229ENST00000641017 3628 ntBASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RPH3AQ9Y2J0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RPH3AQ9Y2J0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RPH3AQ9Y2J0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 RNA5SP139-201ENST00000364340 117 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 RPL23AP29-201ENST00000397284 453 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 AL136116.1-201ENST00000403591 381 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 TPMTP3-201ENST00000411928 735 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 HMGB1P49-201ENST00000418882 569 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 AL953862.1-201ENST00000423016 168 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 PPP1R11P2-201ENST00000423543 382 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 AL158071.1-201ENST00000430315 461 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 SNRPEP7-201ENST00000438350 220 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 MTND5P14-201ENST00000441481 1267 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 SNRPGP6-201ENST00000451124 220 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 MRPS31P2-201ENST00000451581 518 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 RNU6-420P-201ENST00000458780 107 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 AC108729.1-201ENST00000487812 947 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 AC112198.1-201ENST00000505369 1220 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 AP000867.2-201ENST00000532468 320 ntBASIC3.15□□□□□ -1.91
RPH3AQ9Y2J0 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms