Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 RPL23AP69-201ENST00000431134 458 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AL365184.2-201ENST00000431139 435 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 MTCO3P5-201ENST00000433620 714 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AL117351.1-201ENST00000438864 766 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 BX322784.1-201ENST00000455793 1077 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 RN7SL863P-201ENST00000462370 296 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AC011825.1-201ENST00000484967 388 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 TMEM248P1-201ENST00000510579 951 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 NARSP2-201ENST00000518524 679 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AP004247.1-201ENST00000531556 1289 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AP003385.6-201ENST00000531603 374 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AC004024.1-201ENST00000549244 247 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 ZNF192P1-203ENST00000565888 810 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AP001981.2-201ENST00000603241 418 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AC064872.1-201ENST00000604823 1072 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AL031775.1-201ENST00000607014 887 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AC135507.2-201ENST00000612443 309 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 MAPK10-373ENST00000641983 6772 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.87□□□□□ -1.79
DDX4Q9NQI0 AL390237.1-201ENST00000404226 1415 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DDX4Q9NQI0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DDX4Q9NQI0 Y_RNA.51-201ENST00000362725 102 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
DDX4Q9NQI0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.87□□□□□ -1.79
DDX4Q9NQI0 BTF3L4P1-201ENST00000413813 468 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 AC016907.1-201ENST00000419483 435 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 MTCYBP24-201ENST00000420387 1106 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 VN1R108P-201ENST00000431580 830 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 AL360221.1-201ENST00000445989 335 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 AC002381.1-201ENST00000447049 280 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 RPS20P24-201ENST00000457473 361 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 RAP1BP2-201ENST00000478270 544 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 TXNP6-201ENST00000510190 310 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 MTCO3P44-201ENST00000510977 541 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.87□□□□□ -1.79
DDX4Q9NQI0 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.87□□□□□ -1.79
DDX4Q9NQI0 AC015917.1-201ENST00000579654 510 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 BNIP3P23-201ENST00000599655 511 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 U73023.1-201ENST00000603134 700 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 HMGB1P50-201ENST00000605814 607 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 AL162274.2-201ENST00000614406 332 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 MTND4P16-201ENST00000466108 1367 ntBASIC3.87□□□□□ -1.79
DDX4Q9NQI0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
DDX4Q9NQI0 AC027287.1-201ENST00000553115 1453 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 PABPC1P9-201ENST00000426076 1612 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AL161781.1-201ENST00000354277 403 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 RNU6-28P-201ENST00000362378 107 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 RNU6-623P-201ENST00000363143 105 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 RNU5F-7P-201ENST00000363696 115 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 RNU6-289P-201ENST00000364093 107 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 SNORA7.2-201ENST00000364446 145 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AC007899.1-201ENST00000412776 775 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 RPL17P12-201ENST00000413391 526 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AC005517.2-201ENST00000424673 553 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AC002075.2-201ENST00000425207 252 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 PSMA6P3-201ENST00000428242 164 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 NEK4P1-201ENST00000433383 879 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 SDCBPP1-201ENST00000440192 890 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 TAF9P1-201ENST00000445421 515 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AC005297.2-201ENST00000450430 606 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 HMGB1P15-201ENST00000453854 435 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 TAF9P2-201ENST00000454958 515 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 RPL27AP5-201ENST00000469428 449 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 RPS4XP13-201ENST00000483219 789 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 MTND4P2-201ENST00000507767 1203 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AC116347.2-201ENST00000514912 523 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 MIR2276-201ENST00000516886 89 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AL353997.4-201ENST00000586196 166 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AC083760.1-201ENST00000589621 670 ntBASIC3.86□□□□□ -1.79
DDX4Q9NQI0 AL451007.1-201ENST00000595491 289 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms