Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 RNU6ATAC-201ENST00000408749 126 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 CCDC58P2-201ENST00000417131 366 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 Z75741.2-201ENST00000417272 1167 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 HMGN2P30-201ENST00000423237 256 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 GTF2IP3-201ENST00000433887 494 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AC092573.2-201ENST00000434546 243 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 THAP5P1-201ENST00000439089 262 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 RPL18AP17-201ENST00000455326 198 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 OR2A20P-203ENST00000498397 1268 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AC117522.3-201ENST00000507974 584 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 RNU6-583P-201ENST00000516012 92 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 SNORA31.22-201ENST00000517204 135 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 LRRC6P1-201ENST00000532188 885 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 OR5BN1P-201ENST00000532955 829 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 HMGB1P14-201ENST00000557424 591 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AC093227.2-201ENST00000589357 285 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 VN1R85P-201ENST00000601587 426 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 DUXAP4-201ENST00000603046 613 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AL450472.3-201ENST00000615578 367 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 MIR6130-201ENST00000619419 109 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AC123767.1-202ENST00000620407 817 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AC012321.1-201ENST00000561622 1588 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 AL049781.1-201ENST00000623195 3585 ntBASIC2.35□□□□□ -2.03
SLIRPQ9GZT3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 RNA5SP50-201ENST00000363731 107 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 TPMTP2-201ENST00000414372 726 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AL356320.2-201ENST00000417263 507 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 ATG3P1-201ENST00000419507 911 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AL645937.1-202ENST00000421799 937 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 NDUFB4P7-201ENST00000423198 363 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AC097713.2-201ENST00000430199 356 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AL445584.1-201ENST00000431451 330 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AC090774.1-201ENST00000435925 246 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 MTND4P6-201ENST00000438297 472 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 RPS29P12-201ENST00000460178 152 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AC079203.1-201ENST00000487972 404 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 PRELID3BP5-201ENST00000508612 460 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AC006499.2-201ENST00000513470 337 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AC093677.1-201ENST00000514414 678 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 SNORA74D-201ENST00000516404 141 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AC100870.1-201ENST00000522035 505 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AC090695.1-201ENST00000561269 1222 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 ACTR3BP3-201ENST00000565577 979 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AC090615.1-201ENST00000577519 154 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 MIR5092-201ENST00000583139 88 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AL606834.3-201ENST00000602615 496 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 DUXAP10-204ENST00000612052 616 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AC090132.2-201ENST00000615881 347 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AC068724.3-201ENST00000625906 87 ntBASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SLIRPQ9GZT3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
SLIRPQ9GZT3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 RNU6-28P-201ENST00000362378 107 ntBASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 RNU6-1122P-201ENST00000384449 107 ntBASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 TAF9BP1-201ENST00000396646 746 ntBASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 AL031679.1-201ENST00000400616 525 ntBASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 RAB9AP3-201ENST00000412737 573 ntBASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 AL389915.1-201ENST00000422463 466 ntBASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 NIPA2P1-201ENST00000426223 976 ntBASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 AC091862.1-201ENST00000438016 1100 ntBASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 LSM1P1-201ENST00000438629 273 ntBASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 H2AFZP6-201ENST00000444403 394 ntBASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 RAB9AP1-201ENST00000449393 573 ntBASIC2.33□□□□□ -2.04
SLIRPQ9GZT3 RPL27AP5-201ENST00000469428 449 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms