Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC090772.4-201ENST00000623599 362 ntBASIC1.97□□□□□ -2.09
NKX6-2Q9C056 AL512506.2-201ENST00000624472 458 ntBASIC1.97□□□□□ -2.09
NKX6-2Q9C056 ZNF849P-201ENST00000594711 1566 ntBASIC1.97□□□□□ -2.09
NKX6-2Q9C056 MTND4P21-201ENST00000453886 1357 ntBASIC1.97□□□□□ -2.09
NKX6-2Q9C056 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
NKX6-2Q9C056 TPTE2P4-201ENST00000258589 1605 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NKX6-2Q9C056 MIR21-201ENST00000362134 72 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 RNA5SP456-201ENST00000364002 114 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 RNU2-28P-201ENST00000410457 189 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 BOLA3P4-201ENST00000418151 400 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AC069157.1-201ENST00000421749 137 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AL121882.1-201ENST00000422893 417 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 RAC1P8-201ENST00000427086 527 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.96□□□□□ -2.1
NKX6-2Q9C056 RPL32P14-201ENST00000463196 378 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AC103987.1-201ENST00000473394 348 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AC113420.1-201ENST00000507903 571 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.96□□□□□ -2.1
NKX6-2Q9C056 SNORA48.10-201ENST00000516965 160 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.96□□□□□ -2.1
NKX6-2Q9C056 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.96□□□□□ -2.1
NKX6-2Q9C056 CR383656.7-201ENST00000548164 174 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AC090502.2-201ENST00000549267 280 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.96□□□□□ -2.1
NKX6-2Q9C056 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AC093510.2-201ENST00000562820 896 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.96□□□□□ -2.1
NKX6-2Q9C056 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AC105224.1-201ENST00000587055 421 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AC002984.1-201ENST00000591692 448 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AL031176.1-201ENST00000604554 466 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AL035413.2-201ENST00000604801 525 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AL136363.1-201ENST00000605349 337 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 U6.105-201ENST00000637379 88 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.96□□□□□ -2.1
NKX6-2Q9C056 OR5H6-203ENST00000642105 978 ntBASIC1.96□□□□□ -2.1
NKX6-2Q9C056 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NKX6-2Q9C056 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC1.96□□□□□ -2.1
NKX6-2Q9C056 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 HSPE1P11-201ENST00000339579 310 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 OR56A5-201ENST00000340110 738 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 SNORA38.1-201ENST00000364172 131 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 RNA5SP138-201ENST00000365098 114 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 MIR183-201ENST00000384958 110 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 MIR767-201ENST00000390228 109 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 MTND3P20-201ENST00000407663 186 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 MIR1193-201ENST00000408109 78 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 U3.40-201ENST00000408706 208 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 RNU2-43P-201ENST00000410306 190 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 RNU6-575P-201ENST00000411326 105 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 MTCO3P1-205ENST00000422088 832 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 RPL7L1P10-201ENST00000427790 463 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 H2AFZP6-201ENST00000444403 394 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AC044797.1-201ENST00000445744 679 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AC092155.2-201ENST00000454675 477 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 RNU6-717P-201ENST00000459076 104 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 RPS15AP34-201ENST00000487776 387 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AC022493.1-201ENST00000492984 337 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 RPL30P5-201ENST00000494923 336 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AC091860.1-201ENST00000505723 432 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AL359273.1-201ENST00000510918 627 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 OR5BM1P-201ENST00000512021 366 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 SETP12-201ENST00000514068 805 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 SETP7-201ENST00000552169 453 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 LINC00557-201ENST00000563184 1279 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AC068135.2-201ENST00000569293 1028 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 OR1M4P-201ENST00000589199 287 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 AC006213.4-201ENST00000616184 634 ntBASIC1.95□□□□□ -2.1
NKX6-2Q9C056 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC1.95□□□□□ -2.1
NKX6-2Q9C056 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms